| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_1393 |
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| Symbol | |
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| ID | 6115633 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | + |
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| Start bp | 1749033 |
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| End bp | 1749959 |
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| Gene Length | 927 bp |
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| Protein Length | 308 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 641632881 |
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| Product | LysR family transcriptional regulator |
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| Protein accession | YP_001759780 |
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| Protein GI | 170725754 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.182741 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGATATCA CTAAAACCCA ACTTAATATC AATCACCTGA AGATGATATG CACTATCGCT
AAGTCTGAGA CGGTTAAAGA GGCTGCTGAG TCTCTGTTTA TCACCCAACC GGCACTCACT
AACCGTATTC GAGAAGCCGA ACGCCGCCTT AATACCAGTT TGTTTGTTCG CAGAGGACGT
AAGCTCATTA TCTCCAATGC TGGAAAGCGC CTGCTGCATT CTGCTAAGAA AATTTTAGAG
GAGTTGGGAC GAGCAGAATA TGATATCGCG CGATTATCCG ATGGTGTCGA GCAAGTGTTG
AGGATAGGGC TGCCCCATTA TGCTTCATTT AAATGGTTAC CTGCAGTCAC TAGTTACTTT
GCTAAGGAGC TGCCAAATAT TGAGCTGGAG ATCACCGCTG CTGCTGCGAA ACGTCCATTG
AATGCGCTGT TTAATGGGGA TGTAGATATC GCTATGATCT CAAGCTCTCA GCAGAAACTC
TCACTAGATG AGAACCTCTA CGAGTCCAGT TTTCTGTTGC AAGATGAGCT GATGGCTTGT
CTCTCAAAAG ATCATAAGAA GGCTGAACGA AATCATCTAG TTGCAGAAGA TTTTATTGAT
GAAACCTATA TCACTAACTC GACCATTCCG GAGAAGGACA GGGAGTATGA ACTCTTCTTT
CAGCCGGAAA ATGTTTTGCC AAGAAAGGTT CTGCAAGTTG GATTTAATGA AGCCATCCTT
GAGCTCACCA AGGTCAACCT AGGTGTGACT ATTATGTCGA AACATCTGGT CAGCCCCTAT
TTAGAAAATG GCATGATTAG AACGGTGCCG TTAGGGGAGC AGGGATTAAA AATTTACTGG
CACCTTGTGT ACCTCAAACA GGGAAAAATA GCTAAACCTG CTAAGGTGCT AACCACGATT
TTAAAGCAGT ATGCTAATGA GAGTTAA
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| Protein sequence | MDITKTQLNI NHLKMICTIA KSETVKEAAE SLFITQPALT NRIREAERRL NTSLFVRRGR
KLIISNAGKR LLHSAKKILE ELGRAEYDIA RLSDGVEQVL RIGLPHYASF KWLPAVTSYF
AKELPNIELE ITAAAAKRPL NALFNGDVDI AMISSSQQKL SLDENLYESS FLLQDELMAC
LSKDHKKAER NHLVAEDFID ETYITNSTIP EKDREYELFF QPENVLPRKV LQVGFNEAIL
ELTKVNLGVT IMSKHLVSPY LENGMIRTVP LGEQGLKIYW HLVYLKQGKI AKPAKVLTTI
LKQYANES
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