17 homologs were found in PanDaTox collection
for query gene Swoo_1297 on replicon NC_010506
Organism: Shewanella woodyi ATCC 51908



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_010506  Swoo_1297  type IV pilus assembly protein PilX  100 
 
 		 142 aa  280  6.000000000000001e-75  Shewanella woodyi ATCC 51908  Bacteria  normal  1  normal  0.627345 
 
 
-
 
NC_009901  Spea_1089  type IV pilus assembly protein PilX  60.84 
 
 		 145 aa  177  4e-44  Shewanella pealeana ATCC 700345  Bacteria  normal  1  n/a   
 
 
-
 
NC_009997  Sbal195_1162  type IV pilus assembly protein PilX  56.49 
 
 		 153 aa  171  1.9999999999999998e-42  Shewanella baltica OS195  Bacteria  normal  1  normal  0.834518 
 
 
-
 
NC_009665  Shew185_1127  type IV pilus assembly protein PilX  56.49 
 
 		 153 aa  172  1.9999999999999998e-42  Shewanella baltica OS185  Bacteria  normal  1  n/a   
 
 
-
 
NC_009052  Sbal_1060  type IV pilus assembly protein PilX  56.49 
 
 		 153 aa  171  2.9999999999999996e-42  Shewanella baltica OS155  Bacteria  normal  1  n/a   
 
 
-
 
NC_004347  SO_3526  hypothetical protein  55.84 
 
 		 153 aa  170  5.999999999999999e-42  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_011663  Sbal223_3229  hypothetical protein  55.84 
 
 		 153 aa  170  7.999999999999999e-42  Shewanella baltica OS223  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009438  Sputcn32_1065  type IV pilus assembly protein PilX  58.62 
 
 		 144 aa  167  5e-41  Shewanella putrefaciens CN-32  Bacteria  normal  1  n/a   
 
 
-
 
NC_009831  Ssed_1200  type IV pilus assembly protein PilX  60.69 
 
 		 144 aa  165  2.9999999999999998e-40  Shewanella sediminis HAW-EB3  Bacteria  hitchhiker  0.00971414  normal  1 
 
 
-
 
NC_008322  Shewmr7_3033  type IV pilus assembly protein PilX  56.49 
 
 		 156 aa  164  5e-40  Shewanella sp. MR-7  Bacteria  normal  1  normal  0.0748735 
 
 
-
 
NC_008321  Shewmr4_2951  type IV pilus assembly protein PilX  55.33 
 
 		 150 aa  162  2.0000000000000002e-39  Shewanella sp. MR-4  Bacteria  normal  0.114107  normal  0.117946 
 
 
-
 
NC_008577  Shewana3_3130  type IV pilus assembly protein PilX  54.78 
 
 		 153 aa  159  1e-38  Shewanella sp. ANA-3  Bacteria  normal  1  normal  0.706597 
 
 
-
 
NC_008700  Sama_0930  type IV pilus assembly protein PilX  53.9 
 
 		 156 aa  152  1e-36  Shewanella amazonensis SB2B  Bacteria  normal  0.881011  normal  1 
 
 
-
 
NC_009092  Shew_1105  type IV pilus assembly protein PilX  58.62 
 
 		 144 aa  149  2e-35  Shewanella loihica PV-4  Bacteria  normal  0.711381  normal  1 
 
 
-
 
NC_008345  Sfri_2884  type IV pilus assembly protein PilX  50.35 
 
 		 150 aa  132  1.9999999999999998e-30  Shewanella frigidimarina NCIMB 400  Bacteria  normal  0.245719  n/a   
 
 
-
 
NC_007954  Sden_2717  type IV pilus assembly protein PilX  56.43 
 
 		 142 aa  123  7e-28  Shewanella denitrificans OS217  Bacteria  normal  1  n/a   
 
 
-
 
NC_003910  CPS_1215  hypothetical protein  29.56 
 
 		 182 aa  63.2  0.000000001  Colwellia psychrerythraea 34H  Bacteria  normal  0.684436  n/a   
 
 
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