Gene Swoo_1174 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwoo_1174 
Symbol 
ID6115409 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella woodyi ATCC 51908 
KingdomBacteria 
Replicon accessionNC_010506 
Strand
Start bp1507220 
End bp1507600 
Gene Length381 bp 
Protein Length126 aa 
Translation table11 
GC content49% 
IMG OID641632658 
Producthypothetical protein 
Protein accessionYP_001759562 
Protein GI170725536 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00000759972 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAAAAAAC ACCTTTATAC GGTCGCACTA CTGCTCGCTA GCAGCGCTTT TGGCGCTGCT 
GCCACCGAGC AGTACCCGAT TGATAAGGCA ACAGGTCTTA TCATGGCTCC GGGTTGGGAG
ATGGTTAAAA ATCAGTGCAA CGCCTGCCAT ACCAGCTTGA TTATTCCCCA GAACGTGGGC
AGTCGAGAGG TGTGGCGTGA CACCATTCAG TGGATGATAG ACACCCAAGG CCTATGGGAT
CTTAATGAAA CATGGGATCC TGTACTCGAC TACCTTGAGA CCTATTACAA TGAATCGGGT
ATTGATATGA AGATCTTCAG ACGTAAGCCG TTAGAAGCCG CTCAGATGCC CCCCCTTCCT
CAAAAGATGG AGATCGAATA A
 
Protein sequence
MKKHLYTVAL LLASSAFGAA ATEQYPIDKA TGLIMAPGWE MVKNQCNACH TSLIIPQNVG 
SREVWRDTIQ WMIDTQGLWD LNETWDPVLD YLETYYNESG IDMKIFRRKP LEAAQMPPLP
QKMEIE