Gene Swoo_1125 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwoo_1125 
Symbol 
ID6115359 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella woodyi ATCC 51908 
KingdomBacteria 
Replicon accessionNC_010506 
Strand
Start bp1445328 
End bp1446665 
Gene Length1338 bp 
Protein Length445 aa 
Translation table11 
GC content42% 
IMG OID641632608 
Producthypothetical protein 
Protein accessionYP_001759513 
Protein GI170725487 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGACTAA ATCAAGTATT AAGTTTAAGT TTTTTGGGAT GCACCCTTTT AACAGGATCA 
TTTTTAAGTA TTCCAACGGT GTCTGCTGCG AGTGATTTGA AAGCCTCTCC CTCCGGTGCT
GTTATGCGAG GTAAAGGACC TAGTGGTATC AGTTATTGCG ATCTTGCAAG AGGAACGAAT
GTAGATGGTG GTTATTGCCA AATTTTATGG TCAGATCTGC AACGAGCTCG ATTCAGCCAG
AAAGAATACG ATGCACTAAC GACAACAGCA GAGAAAGATA CCTATCTCGA TAGTAAGTTT
CAGTTCGAGC TTATTGATGA GGCATTAGCT GCTGCGAAGG CGTTCAATGA TCAGCATGAC
AGAGGTGATG CTGATAAATT TAAGGTTCTG CTTAGGATCC GAGCAGGTGT CGACTCTCCT
GATTGGGTAA GAAATAGAAC TAAGGAAGTT GACTGGTACT TTAAGAGTTT TGCTGATACG
CAAAAACATA AACTGCCGGC GTTTTGGACT GAGAAATATC AGGATAGCTA TCTTTCATTG
ATGAGAGGTT TGGCGGCCAA ATATGATAAT AACGAATTAA TCGGTGCGGT TGCTGCCTCT
ATGTGTATGA CAGTTCATTC TGAGATTATG TGGAATCGTA CTGGTCGCAA AAAAGATGCA
GACGGTAATG AGATCCGCAA TGCTGATGGT AAAAATCCCC GCCAGGTAAA TATTGCTGCA
ATGACAGATG CCTCAGTATT AGGGAGTGAT GTGTACACTA ACCCTAAGGA TTATGCATGC
CTAGAAAGAC AAGTTGATAT CCACAAGAAC ACCTGGAAGC GCACACCGAG TATTTTCGGT
AGCCACCTTT ACCAAAAGTA TTATCTGACA GAAAAAGATG CGAATCATGC TGCCGATGAG
CAGGGTAAAA AGCGCAGTAA AATAGATGCT GGTGATGCGA CGACTGTAGT CAATAAAACC
CACGATATAT TTAGTTACTG TCGTGAGAAG TTGGGTGACC GCTGTATACT TGGTAACAAT
AGCTTACGAG ATGATGAAGT TGCGATAAAT GAGAACATTT ATGATCTATT GTCTACTTAT
GGACCACCAC TTTATTTCCA AACCAATGTT TTTGGATCGC TAGAAGACAA AGAGCCTAAA
GATGCTTTTA GCTATGAGCA GATGTTAGCT GCTATGGATT TAGCTGGGAG TACTTTTGGT
GCCCTTATGG TTGAGATGGC TATGGGCTGG GATTGTGATA ATGAATATGA CAAAACAGAT
TGTACCAAAG CTGATGTGCA CTCCGAGGCT CCTAATTTCA AAGCTCCTCG TGATGTGTTG
AAGGCTAACG GCAGTTAG
 
Protein sequence
MRLNQVLSLS FLGCTLLTGS FLSIPTVSAA SDLKASPSGA VMRGKGPSGI SYCDLARGTN 
VDGGYCQILW SDLQRARFSQ KEYDALTTTA EKDTYLDSKF QFELIDEALA AAKAFNDQHD
RGDADKFKVL LRIRAGVDSP DWVRNRTKEV DWYFKSFADT QKHKLPAFWT EKYQDSYLSL
MRGLAAKYDN NELIGAVAAS MCMTVHSEIM WNRTGRKKDA DGNEIRNADG KNPRQVNIAA
MTDASVLGSD VYTNPKDYAC LERQVDIHKN TWKRTPSIFG SHLYQKYYLT EKDANHAADE
QGKKRSKIDA GDATTVVNKT HDIFSYCREK LGDRCILGNN SLRDDEVAIN ENIYDLLSTY
GPPLYFQTNV FGSLEDKEPK DAFSYEQMLA AMDLAGSTFG ALMVEMAMGW DCDNEYDKTD
CTKADVHSEA PNFKAPRDVL KANGS