Gene Swoo_1122 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwoo_1122 
Symbol 
ID6115356 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella woodyi ATCC 51908 
KingdomBacteria 
Replicon accessionNC_010506 
Strand
Start bp1442277 
End bp1442879 
Gene Length603 bp 
Protein Length200 aa 
Translation table11 
GC content47% 
IMG OID641632605 
Productnitroreductase 
Protein accessionYP_001759510 
Protein GI170725484 
COG category[C] Energy production and conversion 
COG ID[COG0778] Nitroreductase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAGTTT TTCAAGCAAT TAAACAGCGC AGAGCCGTAA AACACTATCA TGCTGATGCC 
GAGATGCCTG CAGAGGATTT TGATAAAATT ATGTCCGCGG TGATCTTGTC ACCAACATCC
TACAATATCC AGCACTGGCG TTTTGTTCGC GTTACAGATA AGGAACAACG AAATAAAGTA
AAAAGTGCAG CATGGGGACA AGCTCAAGTA GCCGATGCGT CCGAGTTAGT CATTTTATGT
GCTGACATTA ACGCGTGGAA TGATAGGCCA GAGCGCTATG TCATCAACAG CCCTCAGGAA
ACCCAAGATA TGCTGCTGCC CATGATGGAT GCCTTTTACA ACGGCAAAGA GCAGATACAG
CGAGATGAAG CGATGCGCTC TTGTGGCATC GCTGCGCAGA CTATGATGTT GGCTGCCAAA
GAGCTAGGCT ACGATACCTG CCCTATGGTG GGATTTGACA GAGAGGAGTT AGCTCGACTC
ATTCGCCTGC CACAAGGCTA TGTGATTGCC ATGATGATTG CCATAGGAAC AGCAGAGAAG
TCAGCTCACC CTCGCGGTGG ACAATTACCA TTAAACGAAG TGCTCGCTGA AAACTATTTT
TAA
 
Protein sequence
MEVFQAIKQR RAVKHYHADA EMPAEDFDKI MSAVILSPTS YNIQHWRFVR VTDKEQRNKV 
KSAAWGQAQV ADASELVILC ADINAWNDRP ERYVINSPQE TQDMLLPMMD AFYNGKEQIQ
RDEAMRSCGI AAQTMMLAAK ELGYDTCPMV GFDREELARL IRLPQGYVIA MMIAIGTAEK
SAHPRGGQLP LNEVLAENYF