Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swoo_1122 |
Symbol | |
ID | 6115356 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella woodyi ATCC 51908 |
Kingdom | Bacteria |
Replicon accession | NC_010506 |
Strand | - |
Start bp | 1442277 |
End bp | 1442879 |
Gene Length | 603 bp |
Protein Length | 200 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 641632605 |
Product | nitroreductase |
Protein accession | YP_001759510 |
Protein GI | 170725484 |
COG category | [C] Energy production and conversion |
COG ID | [COG0778] Nitroreductase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 34 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGAAGTTT TTCAAGCAAT TAAACAGCGC AGAGCCGTAA AACACTATCA TGCTGATGCC GAGATGCCTG CAGAGGATTT TGATAAAATT ATGTCCGCGG TGATCTTGTC ACCAACATCC TACAATATCC AGCACTGGCG TTTTGTTCGC GTTACAGATA AGGAACAACG AAATAAAGTA AAAAGTGCAG CATGGGGACA AGCTCAAGTA GCCGATGCGT CCGAGTTAGT CATTTTATGT GCTGACATTA ACGCGTGGAA TGATAGGCCA GAGCGCTATG TCATCAACAG CCCTCAGGAA ACCCAAGATA TGCTGCTGCC CATGATGGAT GCCTTTTACA ACGGCAAAGA GCAGATACAG CGAGATGAAG CGATGCGCTC TTGTGGCATC GCTGCGCAGA CTATGATGTT GGCTGCCAAA GAGCTAGGCT ACGATACCTG CCCTATGGTG GGATTTGACA GAGAGGAGTT AGCTCGACTC ATTCGCCTGC CACAAGGCTA TGTGATTGCC ATGATGATTG CCATAGGAAC AGCAGAGAAG TCAGCTCACC CTCGCGGTGG ACAATTACCA TTAAACGAAG TGCTCGCTGA AAACTATTTT TAA
|
Protein sequence | MEVFQAIKQR RAVKHYHADA EMPAEDFDKI MSAVILSPTS YNIQHWRFVR VTDKEQRNKV KSAAWGQAQV ADASELVILC ADINAWNDRP ERYVINSPQE TQDMLLPMMD AFYNGKEQIQ RDEAMRSCGI AAQTMMLAAK ELGYDTCPMV GFDREELARL IRLPQGYVIA MMIAIGTAEK SAHPRGGQLP LNEVLAENYF
|
| |