| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_1097 |
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| Symbol | |
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| ID | 6115331 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | + |
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| Start bp | 1415129 |
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| End bp | 1416319 |
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| Gene Length | 1191 bp |
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| Protein Length | 396 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 641632580 |
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| Product | major facilitator transporter |
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| Protein accession | YP_001759485 |
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| Protein GI | 170725459 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.15308 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.619836 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCATTTA ATGTGTGGGT ACTGACCTTA GCCCAAGCTT TTGCCATGAG TGCAGCCCCT
ATGATGATGT TGCTTGGGGG GATCATTGGC ATCGAGTTGG CACCCGAGCC TGGTTTGGCG
ACACTGCCCA TCACGGCGAT GGTGATAGGA GTTGCTATCT CTGTCCTGCC AGTTACCCAA
TTGATGCGAC GTTTTGGTCG TAAACCTGTC TTTATTTCAG GCTCTATTTT GTCAGCCATA
GCCGGACTTG TTGCCGCCTA TGGTACCCAT GAGAAAAATT TCGTCATTTT CTGCGTCAGC
GGTATTCTGC TTGGGGTGAG CGGCGCTATC GTGCAGCAAT ATCGTTTTGC TGCGATGGAA
GCGGTTGAGC CCAATTTGGG GGCTAAAGCC GCATCTAGGG TGCTATTGGG TGGATTAGTT
GCCGCCTTTT TAGGACCTGA GCTGGCAGTA TTTGGTAGTG AATTAGTTGA TATTCCCTAT
GTAGGCGCTT TTATGTTCCT CACCTTCATC TGTTTACTGG CAGCTTTTAC GCTCTCATTT
TATCGTGAGC CCAATCGAGC TAATCTGGCT CATCAAGATG TTGATCAAAG TGAGATACGT
GCTTTTGGTA CCATCTTGAA TCAGCCTAAA ATCTGGGTTG CTATTGCGGG CGCCATGATA
GGCTTTGCCA TGATGAGCTT TGTGATGACG GCAACGCCAC TGCATATGCA TCACAATGAA
CATTACTCTT TGGCCGACAC TAAGTGGGTG ATCCAGAGTC ATATTATTGC CATGTATCTT
CCCTCCCTAT TTACTGGGTA CTTGGTGGCT AAGTGGGGAG TCACAAGAAT GATGTTGATT
GGATTAACTG CTTATCTGGT GACCATAGTT ATTGCGCTGG CGGGAAGCGA ACTGCTTAAC
TACTGGGTGG CTCTGGTGTT ACTCGGCTTG GGTTGGAATC TATTGTTTGT CGGTGGCACT
GTGCTTCTGC CTCAGTGTTA CCGTGCAGGC GAGGGCTTTA AGGTTCAGGC GTTAAATGAC
ACCTTGGTCT TTGGTGCGCA AGCTTTAGCA TCATTAAGTG CTGGCTGGGT AATACATCAG
TTAGGTTGGC AGTTACTGCT CAATATCTGT ATCCCCTTTA TTGCATTGCA ACTTCTCCTG
ATGGCTTGGT GGCGCTTTAG TGAAAACAGT CGAGCCAGCG CTGTCGAATA A
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| Protein sequence | MPFNVWVLTL AQAFAMSAAP MMMLLGGIIG IELAPEPGLA TLPITAMVIG VAISVLPVTQ
LMRRFGRKPV FISGSILSAI AGLVAAYGTH EKNFVIFCVS GILLGVSGAI VQQYRFAAME
AVEPNLGAKA ASRVLLGGLV AAFLGPELAV FGSELVDIPY VGAFMFLTFI CLLAAFTLSF
YREPNRANLA HQDVDQSEIR AFGTILNQPK IWVAIAGAMI GFAMMSFVMT ATPLHMHHNE
HYSLADTKWV IQSHIIAMYL PSLFTGYLVA KWGVTRMMLI GLTAYLVTIV IALAGSELLN
YWVALVLLGL GWNLLFVGGT VLLPQCYRAG EGFKVQALND TLVFGAQALA SLSAGWVIHQ
LGWQLLLNIC IPFIALQLLL MAWWRFSENS RASAVE
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