| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_1095 |
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| Symbol | |
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| ID | 6115329 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | - |
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| Start bp | 1411502 |
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| End bp | 1412800 |
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| Gene Length | 1299 bp |
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| Protein Length | 432 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 641632578 |
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| Product | DEAD/DEAH box helicase domain-containing protein |
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| Protein accession | YP_001759483 |
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| Protein GI | 170725457 |
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| COG category | [J] Translation, ribosomal structure and biogenesis
[K] Transcription
[L] Replication, recombination and repair |
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| COG ID | [COG0513] Superfamily II DNA and RNA helicases |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.627345 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGATTTG AATCTTTTAG TTTTGCTCCC GAGATTTTGC GCGCCATCTC AGAATGTGGT
TATCAGAAAA TGACACCAGT TCAGCAGCAA GCGATCCCGG CGATTCGCCG TGGCCAAGAT
GTACTGGCAA GTGCCCAAAC TGGCACAGGT AAAACCGCCG CTTTCGCGTT GCCTATCTTA
CAGAAGATGA TCGACAAGCC GAGTGAGACA CAACGCTCTA ACACTCGCGC ACTGATATTA
ACGCCAACTC GTGAACTAGC GAGTCAGATT GCCGACAATA TCAATGATTA CAGCAAGCAT
ATGCAGGTCT CTGTTTTGAC CATCTACGGC GGTGTAAAGC TGGAGACTCA GGCGCAAAAG
ATTAAGCGAG GCGTGGACAT CATAGTCGCG ACTCCAGGGC GTCTACTTGA GCATATTCAA
GCCTGTAACC TTAACCTATC AAATGTCGAC TTTATGGTGC TCGATGAAGC CGACCGTATG
TTAGATATGG GCTTTGTCAG CGATATCCAA AAAGTATTAC AAGCGGTGAA TAAAAACAGC
CAAAAAATGC TGTTTTCAGC CACCTTCTCA TCTTCGGTTA AAAAGCTTGC CAACGACTTC
TTAGATAAGC CTAAGCTTAT CAGCGTCGAT AAGCAGAACA CCACTGCCGA TACCGTTAGC
CAAGTGGTCT ATCCGGTAGA GCAGCGCCGT AAGCGTGAGC TTGTTTCTGA GCTGATCGGT
AAAAAGAACT GGAAACAAGT ACTTATCTTT ACCGCAACCC GTGATGCTGC CGACAAGCTA
GTTAAAGAGC TAAACCTTGA TGGTATCCCC TCATCTGTTG TCCATGGTGA GAAAGCCCAA
GGTAACCGTC GCCGTGCATT GCGCGAGTTT AAAGAGGGTA AAGTGCGCGT ACTAGTCGCC
ACCGAGGTTG CTGCTCGTGG CCTGGATATT CAAGACTTAG AGTATGTTGT TAACTACGAC
CTTCCTTTCC TAGCCGAAGA TTACGTACAC CGTATCGGTC GTACTGGCCG CGCTGGTAAG
TCAGGGGTTG CCATCTCACT GGTGAGCCGT GAAGAGGAGC GCACCTTAGC CGATATCGAA
AAACTTATCG GTAAAAAACT TCCTCGTATC ACCATCGCGG GTTATGAAGT GGGCAGCCGT
GATCTACTGA TTAAACACCT ACAGACCCGC CGCAGCTTCG CCAAGAAGCA AAACCGTCAG
GACAATGTCT CTGAACAGGT GATCGGTGAG CGAAATATGC AAGGTCGCCG CGTTAAGGTG
AAGAACTCAT CTAACGCTAA GATTAAGAAA TCTAAGTAA
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| Protein sequence | MRFESFSFAP EILRAISECG YQKMTPVQQQ AIPAIRRGQD VLASAQTGTG KTAAFALPIL
QKMIDKPSET QRSNTRALIL TPTRELASQI ADNINDYSKH MQVSVLTIYG GVKLETQAQK
IKRGVDIIVA TPGRLLEHIQ ACNLNLSNVD FMVLDEADRM LDMGFVSDIQ KVLQAVNKNS
QKMLFSATFS SSVKKLANDF LDKPKLISVD KQNTTADTVS QVVYPVEQRR KRELVSELIG
KKNWKQVLIF TATRDAADKL VKELNLDGIP SSVVHGEKAQ GNRRRALREF KEGKVRVLVA
TEVAARGLDI QDLEYVVNYD LPFLAEDYVH RIGRTGRAGK SGVAISLVSR EEERTLADIE
KLIGKKLPRI TIAGYEVGSR DLLIKHLQTR RSFAKKQNRQ DNVSEQVIGE RNMQGRRVKV
KNSSNAKIKK SK
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