Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swoo_1034 |
Symbol | |
ID | 6115268 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella woodyi ATCC 51908 |
Kingdom | Bacteria |
Replicon accession | NC_010506 |
Strand | + |
Start bp | 1344768 |
End bp | 1345202 |
Gene Length | 435 bp |
Protein Length | 144 aa |
Translation table | 11 |
GC content | 37% |
IMG OID | 641632517 |
Product | transposase IS200-family protein |
Protein accession | YP_001759422 |
Protein GI | 170725396 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG1943] Transposase and inactivated derivatives |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGTAGAT ATGAGAAAGC ATCGCATGTG TATTGGCGAT GTCAATATCA CATAGTTTGG ACACCTAAGT ATAGGTTTAG GATTTTAAAG AATAAGTTAG GAAAAGATGT TTACCGATGT ATTCATGTCT ATAGTGAGCA GTTAGGGTGT GTGGTTGTAG AGTTGAATGT ACAAATAGAC CATGTACATC TGGTTATCAA AGTTCCTCCG AAGCTATCGA TTTCAAAGTT GATGGGTGCT TTAAAAGGTA AAATTGCTTT GAAAATGTTT AGCAAGTATC CGTATCTTCG GAAAAATAAG CTATGGGGAA ATCACTTTTG GCAAAGAGGT TACTTTGTTG ACACAGTGGG GATTAATGAG GAAGTGATTC GAAGATATGT AAGGCATCAA GAAAAGGTTG AAAAACAGGA GCAGCCGCAA TTAGATTTGA AGTAG
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Protein sequence | MSRYEKASHV YWRCQYHIVW TPKYRFRILK NKLGKDVYRC IHVYSEQLGC VVVELNVQID HVHLVIKVPP KLSISKLMGA LKGKIALKMF SKYPYLRKNK LWGNHFWQRG YFVDTVGINE EVIRRYVRHQ EKVEKQEQPQ LDLK
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