Gene Swoo_1034 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwoo_1034 
Symbol 
ID6115268 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella woodyi ATCC 51908 
KingdomBacteria 
Replicon accessionNC_010506 
Strand
Start bp1344768 
End bp1345202 
Gene Length435 bp 
Protein Length144 aa 
Translation table11 
GC content37% 
IMG OID641632517 
Producttransposase IS200-family protein 
Protein accessionYP_001759422 
Protein GI170725396 
COG category[L] Replication, recombination and repair 
COG ID[COG1943] Transposase and inactivated derivatives 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTAGAT ATGAGAAAGC ATCGCATGTG TATTGGCGAT GTCAATATCA CATAGTTTGG 
ACACCTAAGT ATAGGTTTAG GATTTTAAAG AATAAGTTAG GAAAAGATGT TTACCGATGT
ATTCATGTCT ATAGTGAGCA GTTAGGGTGT GTGGTTGTAG AGTTGAATGT ACAAATAGAC
CATGTACATC TGGTTATCAA AGTTCCTCCG AAGCTATCGA TTTCAAAGTT GATGGGTGCT
TTAAAAGGTA AAATTGCTTT GAAAATGTTT AGCAAGTATC CGTATCTTCG GAAAAATAAG
CTATGGGGAA ATCACTTTTG GCAAAGAGGT TACTTTGTTG ACACAGTGGG GATTAATGAG
GAAGTGATTC GAAGATATGT AAGGCATCAA GAAAAGGTTG AAAAACAGGA GCAGCCGCAA
TTAGATTTGA AGTAG
 
Protein sequence
MSRYEKASHV YWRCQYHIVW TPKYRFRILK NKLGKDVYRC IHVYSEQLGC VVVELNVQID 
HVHLVIKVPP KLSISKLMGA LKGKIALKMF SKYPYLRKNK LWGNHFWQRG YFVDTVGINE
EVIRRYVRHQ EKVEKQEQPQ LDLK