| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_1003 |
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| Symbol | |
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| ID | 6115237 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | - |
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| Start bp | 1314692 |
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| End bp | 1315663 |
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| Gene Length | 972 bp |
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| Protein Length | 323 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 641632486 |
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| Product | polyprenyl synthetase |
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| Protein accession | YP_001759391 |
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| Protein GI | 170725365 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0142] Geranylgeranyl pyrophosphate synthase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.0000127512 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 2 |
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| Fosmid unclonability p-value | 0.00000500836 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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| |
Sequence |
| Gene sequence | ATGGATTTGA ACGCTATTCG TCAGTTAGCC GACAACGACA TGCAAAACGT CAACAAGCTA
ATATACAAAC AACTAGAATC TGATGTAGCC CTGATAAATC AGTTAGGCTT CTACATTATT
AACGGCGGCG GCAAACGTAT GCGCCCCCTA CTCTCTATCT TAGCTGCACG TGCAGTTGAC
TATAATGGTG AAGCTCACCT GAAGCTTGCC GCCATTATTG AATTTATCCA CACAGCTTCA
CTGCTTCATG ATGATGTTGT TGATGAGTCT ATGTTACGCC GCGGAAGAGA AACTGCTAAT
GCCCTTTTTG GTAACAGTGC CAGCGTACTA GTCGGAGATT TCCTCTATAC CCGCTCATTC
CAGATGATGA CTGAACTGGG TAGCATGGAG GTGCTTGAAG TGCTTGCCGA TGCAACCAAT
GTGCTCGCCG AAGGTGAAGT ACTGCAGTTA ATGAACTGCA ACGACCCAAA TACTACCGAA
GAGAGCTACA TGCGCGTCAT CTACTGTAAA ACGGCCAAGC TTTTCGAAGC TGCAACCCGT
TTAGCAGGTG TGTTAGCTGA CAGCCCTAAA GAGATACAGG TCGCTTTAGC TGACTATGGT
AAATACTTAG GCACCGCTTT CCAATTAACA GATGATCTAC TTGATTATAC TGCTGATACT
GAAGAGCTAG GTAAAAACAT AGGTGATGAT CTTGCTGAGG GGAAACCCAC TCTTCCACTT
ATCTATGCTA TCGCCCACGG CTCAGAAACA GAACAGACGC TTATTCGCAC AGCAATTGAG
AAAGGTGATG GTACAGACAG TATCGACCCC ATTTTAGCAG CACTTGATAA CTGTGGCGCG
CTTGAATACA CCTATAAACG TGCTCAGGAG GAAGCTGAAA AGGCCATAGG CGCACTTTCT
ATCCTTCCAG AGAGTGACTA TAAGCAAGCT TTAATTTCAC TGGCTAAAAT AGCGGTAGCT
CGTAACCATT AA
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| Protein sequence | MDLNAIRQLA DNDMQNVNKL IYKQLESDVA LINQLGFYII NGGGKRMRPL LSILAARAVD
YNGEAHLKLA AIIEFIHTAS LLHDDVVDES MLRRGRETAN ALFGNSASVL VGDFLYTRSF
QMMTELGSME VLEVLADATN VLAEGEVLQL MNCNDPNTTE ESYMRVIYCK TAKLFEAATR
LAGVLADSPK EIQVALADYG KYLGTAFQLT DDLLDYTADT EELGKNIGDD LAEGKPTLPL
IYAIAHGSET EQTLIRTAIE KGDGTDSIDP ILAALDNCGA LEYTYKRAQE EAEKAIGALS
ILPESDYKQA LISLAKIAVA RNH
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