| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_0998 |
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| Symbol | |
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| ID | 6115232 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | + |
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| Start bp | 1308437 |
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| End bp | 1309465 |
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| Gene Length | 1029 bp |
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| Protein Length | 342 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 641632481 |
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| Product | ABC transporter related |
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| Protein accession | YP_001759386 |
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| Protein GI | 170725360 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG3842] ABC-type spermidine/putrescine transport systems, ATPase components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 4 |
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| Fosmid unclonability p-value | 0.000116627 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGTCGACGT TAACCATCAG TGATGTTCAT AGTGATTACC AAGGACAACA GGTTCTTAAA
GGGTTAGATC TTACCCTTAA AAAGGGTGAG ATTGCGGCAC TATTAGGCCC TAGTGGTTGT
GGTAAAACCA CGCTTTTAAG GGCCATCGCA GGGCTGCAAA CCATCAGTCA AGGTGAGATA
TGCATCAATA AGCGAGTGCT CTCTGGACCA AATGTATTTG TACCAAGTGA ACAGCGTGGC
GTAGGCATGA TTTTTCAAGA TTACGCCCTA TTTCCTCATC TGAATGTGGC TGATAACATA
CTTTTTGGAG TAAAAGGGGG GACGAAAGAT CAGCGTAAGA GACGTCTTAA TGAGATGCTC
TCATTAGTTA AGCTCGATGG GTTAAGTCAG CGTTTTCCCC ATGAGCTTTC TGGTGGCCAG
CAGCAGCGAG TATCTATTGC ACGAGCATTA GCCTATGAAC CTGAGCTTTT ACTCCTCGAT
GAACCCTTTT CAAATATTGA TGCCAAGGTA CGTGGTGAGA TGATGCTGGA GATCCGCGCT
ATCTTAAAAG AGAGTAATGT CAGTGCGGTG TTTGTGACTC ACAGTAAAGA TGAAGCTTTT
GTGTTTGCAG ATAAGCTTGC TCTCTTTAAT GGAGGACGAA TAGCGCAATA TGGTACGGCT
GAGGAGCTGT ATAGTTCACC TGATGACAGG TATGTTGCTG AGTTTTTGGG GGCAGGTAAC
TATCTTCAAG CTACAGTTAG CAGCCCCACC AGTGTTGAGA CTGCCTTGGG AACTTTTAAA
AGTTCCGCTG AGTTGAAGCA TGAGCTTAAT TATAAGGGGG AGTTGATGTT AAGGCCTCAG
CAACTGGAGA TTGTAGCTGA TGAAGCTGGA ACAGGGGTTA TCTTAGAGCG TCGTTTTTTA
GGGAATACTT GCCATTATAA GGTTAACGTC GCTGAGCAGA GCTATGAGGT GAATAGCCAA
CTTAGTCAAT TAGTTCCGGG TCAACGAGTT AGCCTGACAA CCCCTGTTCA CTCTTTAGTC
ATGTTTTGA
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| Protein sequence | MSTLTISDVH SDYQGQQVLK GLDLTLKKGE IAALLGPSGC GKTTLLRAIA GLQTISQGEI
CINKRVLSGP NVFVPSEQRG VGMIFQDYAL FPHLNVADNI LFGVKGGTKD QRKRRLNEML
SLVKLDGLSQ RFPHELSGGQ QQRVSIARAL AYEPELLLLD EPFSNIDAKV RGEMMLEIRA
ILKESNVSAV FVTHSKDEAF VFADKLALFN GGRIAQYGTA EELYSSPDDR YVAEFLGAGN
YLQATVSSPT SVETALGTFK SSAELKHELN YKGELMLRPQ QLEIVADEAG TGVILERRFL
GNTCHYKVNV AEQSYEVNSQ LSQLVPGQRV SLTTPVHSLV MF
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