Gene Swoo_0992 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwoo_0992 
Symbol 
ID6115226 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella woodyi ATCC 51908 
KingdomBacteria 
Replicon accessionNC_010506 
Strand
Start bp1302831 
End bp1303421 
Gene Length591 bp 
Protein Length196 aa 
Translation table11 
GC content43% 
IMG OID641632475 
Producthypothetical protein 
Protein accessionYP_001759380 
Protein GI170725354 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00757119 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGAAATTA AAAACCATGG CGCAGAAGTA TCCCAAGCTG CAAAAAGTAA TACTCAGACA 
ACCGAGAATC ATGGAAAGTC AGTCTCTGAG GTGGCGACAA ATAAAACGGC TTATGCCAGT
AGTAAACAGT TGATGAATTC AGCCATTATT TCAGCACAAC AAGAGGTCAG TTTAAGCTCA
AGTAATGAGC CGCTTGTACT GCTATACCGT GCAGCAATCG AAGCGATCAA TGAAGAGTTA
GCTCCTTCAA TGGGTGAGAA TGCGCTACAA ACAGCCTATG ACAATGGGGT TGATACGTCG
CCTGAGGCAA CCGCTGACAG GATCGTCAGT TTTGCCACCA ACTTTTTTAG CTTATACCAA
GAGCAAAATT CCAATATGTC GTTCGATGAA CAGTTGACCT CATTTATGGA GATCATTGGT
GGGGCGATCG ATCAAGGCTT TGATGAAGCT AAAGATATTC TAAACGGCTT ACAAGTTTTG
GAAGGTGATA TAGCAGATGG TGTTGATCAG ACCTACTCCT TGGTTCAGGA TGGGTTGTTA
GCATTTAAAG AGAGTTTTAA TGACGCGGAT GACTCCTTAA CGGCCTCTTA G
 
Protein sequence
MEIKNHGAEV SQAAKSNTQT TENHGKSVSE VATNKTAYAS SKQLMNSAII SAQQEVSLSS 
SNEPLVLLYR AAIEAINEEL APSMGENALQ TAYDNGVDTS PEATADRIVS FATNFFSLYQ
EQNSNMSFDE QLTSFMEIIG GAIDQGFDEA KDILNGLQVL EGDIADGVDQ TYSLVQDGLL
AFKESFNDAD DSLTAS