Gene Swoo_0985 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwoo_0985 
Symbol 
ID6115219 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella woodyi ATCC 51908 
KingdomBacteria 
Replicon accessionNC_010506 
Strand
Start bp1296437 
End bp1297294 
Gene Length858 bp 
Protein Length285 aa 
Translation table11 
GC content45% 
IMG OID641632468 
Producthypothetical protein 
Protein accessionYP_001759373 
Protein GI170725347 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.0380637 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAACATT ACTACAAGTT ACTACTCTTG GGTCTGTTTG CTGTCAGCCC ATTGGCCCAA 
AGTGCAAGTG GAGTCGCATT TGTACATGGA ACCGGAGACC AAAGTGATGC ACTTAATGAT
TACTGGAATC CAAACTTTAT CAACACGATT CGTCAAGGTA TCTCGCAACC TAATAACTAC
ATGGTCGTTA ACTGCGATTT TGATCAATAT ATGTGGGATG CTGCAGCTTC TGGTTGCCTT
GCAACCCAAC TCACTCAATT TATCGATAGC AAAAATATCG ATGACCTCAC CCTAATTACC
CACTCTAATG GTGGCAATGT TGTCAGGTGG ATACTGTCAA ATCCAACCTG GGATAGCCGC
TACCCAAATA TTATCAATGC GGTTAACCAA GTTGTAGCTA TCGCCCCCTC TAGCGGCGGT
ACTCCTCTGG CCGACGCCGT CAACCAAGGC TCAGTATTTG AAACAACTTT AGGTTGGATA
CTAGGATATG GCAGTGACGC TGTTAAACAG CAACAAGTAA GCTGGATGAG CTATTACAAC
AGCACTTGGC TTAATGGCAC CCAAGGCAGA CCTTCATTAA GTGCTCCCTT TGAAGCCGTT
GTTGGCTCTG ATGTCGACTC GGCAATTTGG GATGGTGATA GCTACTGTGC TGGATATCAA
TATCAAGTGG CTTTAGAAAC CACTCAAAAC TGGCTAGATG ATTGCTCCGA TGGATTTTTA
GAGTGTAGCT CTCAAAGCGC AGCAGGTACT GTCTGGTTCA AAGATAAGCA GCGCACAAGA
GGCAGTGAGC CCTTGAGTCA CCAACAGAGT CGGCGCGACT GTTTTAATCT GCACACCATT
ATCCGAGATC ATATATAG
 
Protein sequence
MKHYYKLLLL GLFAVSPLAQ SASGVAFVHG TGDQSDALND YWNPNFINTI RQGISQPNNY 
MVVNCDFDQY MWDAAASGCL ATQLTQFIDS KNIDDLTLIT HSNGGNVVRW ILSNPTWDSR
YPNIINAVNQ VVAIAPSSGG TPLADAVNQG SVFETTLGWI LGYGSDAVKQ QQVSWMSYYN
STWLNGTQGR PSLSAPFEAV VGSDVDSAIW DGDSYCAGYQ YQVALETTQN WLDDCSDGFL
ECSSQSAAGT VWFKDKQRTR GSEPLSHQQS RRDCFNLHTI IRDHI