| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_0983 |
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| Symbol | |
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| ID | 6115217 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | + |
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| Start bp | 1293847 |
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| End bp | 1295055 |
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| Gene Length | 1209 bp |
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| Protein Length | 402 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 641632466 |
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| Product | TPR repeat-containing protein |
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| Protein accession | YP_001759371 |
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| Protein GI | 170725345 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.145285 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAATCGT TTAGCTCTAA TTTTTGCTGT GTTAAGCCTA GTCTCTACAA ATCTAGTCTT
CTGTTTATCT GTCTGATTCT TATCTCTCTT CAAGCTTGTA CCTCTACCTC TAACACCGCT
CATGTTAGCC AAATTGAGCA GTATTTTTAT GATGAACATT TTGTTGAGGT GGATGGTCTT
CCACAGCCTG ATGAGCTCTT TTCGTTACCT GATGATGCGA TAAGAGAGCT CAGGACAGAG
CTACAGCGGG CCAAATTAAC TAAGTCGAAT AACATGCTGG CCAATGAATG GTTGGCTGAA
TATATCAATG CCGAAGAGGG AGCGTTTCAG TATCGAGACA ACATGACTCG TGTTGCCAGT
GAAACCTTTA GCGAACGGGC GGGAAACTGT TTATCTCTGG TGCTGCTGAC ATCGGCCTTA
GCCCAAGAGT TAGGAGTCGA GGTGGAGTTT CAGGAGATTG AGGTGCCACC TGTGTGGGAT
AAGCAGGGGG ATTTTTATCT GGTGAATGGC CATATTAATT TAAGATTATT GCCATTAAGC
CATGGTGATA CCGTGCATAT GTTAAAGCGG GCTATTCAGG TTGATTTTTT GCCTGAGCGA
GCTGTTCGAG GATTCGATAA AAAAAGGATT AACAAAAAGA CAGTTACCGC AATGTTTTAC
AATAATGTCG CCGCTGAATC TCTGGTGATG GGGGACTATG ACAAAGCCTA TGGCTTTTTA
AAGTTAGGCC TGCAAGCGAT GCCAAGTTAT ATGCCCGCGC TGAACACGCT GGCGGTGCTC
TATCGCTACA AGGGGCTAAA CCAAGAGGCT GAAACACTCT ACAAGCTGGC ACTGGAGATA
GATAACTATG ATATGAATGC TCTTTATAAC TATGCGGTGA TGTTAGGAGC ACAAGACAGG
CTTGAGGAGT GGGCGGCCGT GCATAAACGA TTAGAGTTGG AGCGAATCGA TAACCCCTAT
TATTACTATG ATATGGCTCA GCAAGCCTAT TTTGATAAGG AGTATCAAGA TGCGCTACTT
TGGTATAAAC GCGCGGTAGC AAAGGCAGAT TATCGCCATG AGTTCTATTT CGGTTTATCT
AGGGCTTACT GGCAAACAGG TGATGAGCGG CGAGCGCAGG CGAACATGAA GAAGGCTCTT
AATCTTTCAA ATGATGAGAA TAACAAATTA AAGTATCAAT CTAAGCTGCA CGCGATGAAG
AGTCATTAA
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| Protein sequence | MKSFSSNFCC VKPSLYKSSL LFICLILISL QACTSTSNTA HVSQIEQYFY DEHFVEVDGL
PQPDELFSLP DDAIRELRTE LQRAKLTKSN NMLANEWLAE YINAEEGAFQ YRDNMTRVAS
ETFSERAGNC LSLVLLTSAL AQELGVEVEF QEIEVPPVWD KQGDFYLVNG HINLRLLPLS
HGDTVHMLKR AIQVDFLPER AVRGFDKKRI NKKTVTAMFY NNVAAESLVM GDYDKAYGFL
KLGLQAMPSY MPALNTLAVL YRYKGLNQEA ETLYKLALEI DNYDMNALYN YAVMLGAQDR
LEEWAAVHKR LELERIDNPY YYYDMAQQAY FDKEYQDALL WYKRAVAKAD YRHEFYFGLS
RAYWQTGDER RAQANMKKAL NLSNDENNKL KYQSKLHAMK SH
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