Gene Swoo_0924 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwoo_0924 
Symbol 
ID6115158 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella woodyi ATCC 51908 
KingdomBacteria 
Replicon accessionNC_010506 
Strand
Start bp1229013 
End bp1229750 
Gene Length738 bp 
Protein Length245 aa 
Translation table11 
GC content45% 
IMG OID641632407 
Productdienelactone hydrolase 
Protein accessionYP_001759312 
Protein GI170725286 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG0412] Dienelactone hydrolase and related enzymes 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATGGTCA CCCATGAAGT TCACGATATT CCAACCGCCA CTGGAGTGAT GCGAACCTAT 
CTTTATCGCC CTGATGAAGA GGGGCCATTC CCTACCATTT TATTTTATTC CGAGATTTTT
CAGCAAACAG AACCTATAGC AAGAGCCGCG ACAATTATGG CTGGCCATGG TTTTGTGGTG
CTAGTTCCTG AAGTATTTCA TGAGCTTAAC CAAATAGGAA CTGTGCTTGC CTATGATGAT
GCTGGTAAAG ATAAAGGCAA TGAAGATAAG TTTGCTAAAC CTCTAGAGAG CCATGACTCA
GATACAGAGG CACTCGTCCA ATTTGCCAGA AGTCAGCCTT TTTGTACTAG TCAGGTTGGC
AGTATGGGAG TGTGTATTGG TGGTCATTTA GCTTATCGTG CAGCTATTAA CCCTGATATA
TCAGCGGCGT TTTGTTTATA CGCAACCGAT ATCCACTCAA GCACCTTGCC CAGTGAAGAG
GGCAATGACT CTCTTTCCAA AACTGCAGAT ATTCAGGGTG AGCTTGTGAT GGTGTGGGGC
AAGCAAGATC CCCATGTTTC AACCGAGGGA CGTAAACGTG TGTATGAGCA ATTAGAGAGT
ACGCAGAGAA GGTTTACCTG GTTGGAAGTC AATGCGCAAC ATGCCTTTAT GCGCGATGGT
GAAAGTCGTT ATGATCCTGC TTTAGCCATT CAGATGTACC TACAGGCTGT CGCTTTTTTT
CACCGAATCT TACGTTGA
 
Protein sequence
MMVTHEVHDI PTATGVMRTY LYRPDEEGPF PTILFYSEIF QQTEPIARAA TIMAGHGFVV 
LVPEVFHELN QIGTVLAYDD AGKDKGNEDK FAKPLESHDS DTEALVQFAR SQPFCTSQVG
SMGVCIGGHL AYRAAINPDI SAAFCLYATD IHSSTLPSEE GNDSLSKTAD IQGELVMVWG
KQDPHVSTEG RKRVYEQLES TQRRFTWLEV NAQHAFMRDG ESRYDPALAI QMYLQAVAFF
HRILR