| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_0923 |
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| Symbol | |
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| ID | 6115157 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | + |
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| Start bp | 1227894 |
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| End bp | 1228886 |
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| Gene Length | 993 bp |
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| Protein Length | 330 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 641632406 |
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| Product | D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding |
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| Protein accession | YP_001759311 |
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| Protein GI | 170725285 |
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| COG category | [C] Energy production and conversion
[H] Coenzyme transport and metabolism
[R] General function prediction only |
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| COG ID | [COG1052] Lactate dehydrogenase and related dehydrogenases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAATAG GCTTCTTTAG TGCAAAGCAC TATGACATGG AACACTTTGA CCGTTCCAAT
AAGACTTTTG GCGCCGAAAT TGAGTATTTT GACTATCGCT TATGCATGAA GTCTGTGCGG
CTGGCTCATG GGTTTGAGGC CATTTGTGCT TTTGTGAACG ACTCTCTATG TGAAGAGGTG
TTAGTTGAGC TTGCGAGAAA CGGAACTAAG ATAATCGCTA TGCGTTGTGC AGGGTTTAAT
AATGTCGACC TTGTCGCTGC TAAACGTTTA GGTCTACGAG TCGTTAATGT GCCGGCATAT
TCACCTGAGT CTGTTGCAGA GCATACGGTG GCCCTAATGT TGACCCTAAA CAGAAAGGTC
CATAAAGCCT ACCAACGAAC TCGTGATGCA AATTTCTCTT TGGAGGGATT AGTAGGTTTC
AACATGCATG GCCGTACTGT CGGTGTTATC GGTACGGGAA AAATAGGCGT CGCAACCATC
AAAATACTTC AAGGTTTTGG TTGCAAGGTG ATTGCTCACG ATCCCTATCC AAATCCACAG
GTGGTAAACC TTGGAATTGA GTATCAGCCT CTTGATGAGC TCTATTCAGT ATCCGATATC
ATCACTTTGC ATTGTCCACT GACTCCAGCG AATCATCACC TTTTAAGTGC TGAAACCTTT
GATAAAATGA AGCCTGGGGT GATGGTGATT AATACCAGTC GAGGCGGCTT GTTAAACGCA
ATGGATGCGA TGGAGGCCCT TAAAAAAGGT CAATTGGGCT CATTAGGTTT GGATGTGTAT
GAAAATGAGA AATCTCTCTT TTTTGAAGAC AAGTCGAATG AGATTATTCA AGATGATGTA
TTCAGGCGGT TATCTGCTTG TCATAACGTT ATTTTCACAG GTCATCAAGC ATTTTTGACT
GCTGAGGCTT TAGAGGCCAT AGCGTCAACG AGTTTACTAA ATGTGCAGCA ACTACTTGAA
GGTGTAACTT GCCCTAATGA ATTAAAATCA TAA
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| Protein sequence | MKIGFFSAKH YDMEHFDRSN KTFGAEIEYF DYRLCMKSVR LAHGFEAICA FVNDSLCEEV
LVELARNGTK IIAMRCAGFN NVDLVAAKRL GLRVVNVPAY SPESVAEHTV ALMLTLNRKV
HKAYQRTRDA NFSLEGLVGF NMHGRTVGVI GTGKIGVATI KILQGFGCKV IAHDPYPNPQ
VVNLGIEYQP LDELYSVSDI ITLHCPLTPA NHHLLSAETF DKMKPGVMVI NTSRGGLLNA
MDAMEALKKG QLGSLGLDVY ENEKSLFFED KSNEIIQDDV FRRLSACHNV IFTGHQAFLT
AEALEAIAST SLLNVQQLLE GVTCPNELKS
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