| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_0885 |
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| Symbol | |
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| ID | 6115119 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | + |
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| Start bp | 1178856 |
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| End bp | 1179596 |
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| Gene Length | 741 bp |
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| Protein Length | 246 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 641632369 |
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| Product | transcriptional regulator, CadC |
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| Protein accession | YP_001759274 |
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| Protein GI | 170725248 |
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| COG category | [K] Transcription |
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| COG ID | [COG3710] DNA-binding winged-HTH domains |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATTTTGG GTACTTGTCA GTTCGATGCC CACCGGGCTC AACTAAAGAA CCTTACTACT
GGTGATGAAT GGCTGCTACC GAGAGCTGAG CTTCAGGTAT TGAAGTTATT GTTAGCCAGT
CGAGGCTCAG TAGTAGAGAA GCATAAACTC GGTGCTGCCG ATGATGAACA TCCTGCTTTG
ACCGATTCTT CTGTGACACG AGCGGTATTT ATGCTGCGCT CATTCCTTGG AGCCGAACAT
GAACACCTCA TCGAAACGGT AAAGGGGCGA GGTTACCGTT TACGTTGTGA AACCCGTCGT
AGAAGAGATA AGTGGTTAAC GCTAACTTGG GGTAAGCCTT GGCTAGTGCT CGTTATTTTA
CTGCCTTTTA TCGTATTAAC TGCGCTCCAT TTTAGTGAAA ATTATGCCGG TAATGGGCCT
ACGGCTCCCT TAAAAACTGT GGCACTTTCT CTTCCTTCTG GACAAAAGCT GAGCTTGATT
AGTTACAGTA AGTCAAAAAC AAATAATGAG TCGTTATTAC TCCTCATAGA ACAACTTGAA
ATGGGGTTTA AGCAGTGTAT ATCAACGAGT TGGCAACAGG TTTACTTATC TCTTTCCCAT
GATAAACAAG TATTTAATAT AACAATGAAG GGAGATAAAT TAGGTCAGTC GGTGATCAGA
AACTTGAAAC TATCTGACTT TAGACAGCAG AAACAGTTTA TCTCCCAAAC TTGGTTAGAT
GAGGTCGCGC TTTGTGAATA G
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| Protein sequence | MILGTCQFDA HRAQLKNLTT GDEWLLPRAE LQVLKLLLAS RGSVVEKHKL GAADDEHPAL
TDSSVTRAVF MLRSFLGAEH EHLIETVKGR GYRLRCETRR RRDKWLTLTW GKPWLVLVIL
LPFIVLTALH FSENYAGNGP TAPLKTVALS LPSGQKLSLI SYSKSKTNNE SLLLLIEQLE
MGFKQCISTS WQQVYLSLSH DKQVFNITMK GDKLGQSVIR NLKLSDFRQQ KQFISQTWLD
EVALCE
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