| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_0815 |
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| Symbol | |
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| ID | 6115049 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | + |
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| Start bp | 1098845 |
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| End bp | 1100437 |
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| Gene Length | 1593 bp |
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| Protein Length | 530 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 641632300 |
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| Product | BCCT transporter |
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| Protein accession | YP_001759205 |
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| Protein GI | 170725179 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1292] Choline-glycine betaine transporter |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.820785 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 36 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCAAAAAA AGCAGTCAAA TGCTGGGGGA CACTCAATGT CTAATATAAC CGATAGCACA
ATGATGACGG ATAAACCTGG ATCCGTTTTA GAGAAATTAG GAGTCGATAA TCCAGCTTTT
TGGATGAGCG GTGGCTTTAT CAGCCTGTTC GTTCTCTTAG CCCTTTTTGA TAACCAACTT
CTGTCAGAGA TAGTTAACGC TGGTTTCGCC TGGTCAGTGA ACTATTTTGG CCCATTTTGG
CAAATTTTGA TGTTAATGAC CTTTGTGATT GCCATTGCAT TGGCCTCTGC GAAAACGGGT
AATGTTCGTT TAGGTAATCT GGATAAACCA GAAATTGATG GCTTCAAATG GATGGCGATC
ATCTTATGTA CCTTATTAGC CGGTGGTGGC GTATTTTGGG CTGCAGCCGA GCCTATTGCA
CACTTTGTTT CTCCTCCACC ACTCTATGGG GCTCAAGAGG ATAAGATGCA GGGGGCATTT
AATGCCTTGT CTCAATCTTT TATGCACTGG GGTTTTTTAG CCTGGGCGAT TTTAGGTAGC
TTAACCTCGA TTGTCTTGAT GCACCTTCAT TACGATAAGG GCTTACCGCT GCAACCTCGA
ACCTTGCTTT ACCCCATTTT AGGTGAGCGG GCATTGAAAG GCGCGACAGG AGCTTTGATT
GATGCATGTT GTATCATTGC TGTGGCAGCT GGAACTATTG GCCCTATTGG ATTTTTAGGC
TTGCAGCTTA GTTTCGCGCT AAATGCCCTT TTTGGTATTC CCGATGGCTT TACCACACAA
CTTATTATTG TGATGTTGGC GATCGTTATC TATACCATCT CTGCCTTGAG TGGAGTCAAC
CGCGGGATCC AGATCCTTAG CCGTTATAAC GTCATTTTAG CGGTTGGTTT GATTATCTAT
ATTCTACTAT TTGGTCCAAC AAATTTTATC GTCAATAGCT ACCTGCAAGG GGTTGGGACT
ATGATCGATA ACTTTATCCC TATGGCGACC TATCGAGGTG ATGAGGGCTG GTTAAGCTGG
TGGACAGTAT TCTTCTGGGG CTGGTTTATT GGTTATGGTC CTATGATGGC GATCTTTCTT
GCCAAGATCT CTCGAGGTTA CACCATTAGA AAGGTCGTTT TCTCAATCTG TATTATCGCA
CCACTGATCA CCTGCTTCTG GTTTACTGTG GTTGGCGGCT CTGGCCTAGC ATTTGAGATA
GCCAATCCTG GTTCTGTCAG TAAGGCATTT GAAGGTTTTA ATCTACCTGG TGCTTTATTA
GCGGTCACTA ATCAATTACC TTTCCCTATG GTGATCTCGA TTCTATTCTT AATTCTGACC
ACCATTTTTA TTGTCACAAC CGGTGACTCA ATGACTTACA CCATTAGTGT TGTGATCAGT
GGTTCAACAG AACCAAACGC TGTGATTAGG ATTTTTTGGG GAATTATGAT GGGTATTACC
GCCATTATAT TGATCTCACT AGGCTCTGGA GGGGTGACGG CATTGCAATC CTTTATCGTT
ATTACCGCGG TTCCTGTGTC GTTGATCCTC TTACCTTCCC TATGGAATGG GCCACAAATC
GCCATGAAGA TGGCAAAGGC TCAAGGTCTA TAA
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| Protein sequence | MQKKQSNAGG HSMSNITDST MMTDKPGSVL EKLGVDNPAF WMSGGFISLF VLLALFDNQL
LSEIVNAGFA WSVNYFGPFW QILMLMTFVI AIALASAKTG NVRLGNLDKP EIDGFKWMAI
ILCTLLAGGG VFWAAAEPIA HFVSPPPLYG AQEDKMQGAF NALSQSFMHW GFLAWAILGS
LTSIVLMHLH YDKGLPLQPR TLLYPILGER ALKGATGALI DACCIIAVAA GTIGPIGFLG
LQLSFALNAL FGIPDGFTTQ LIIVMLAIVI YTISALSGVN RGIQILSRYN VILAVGLIIY
ILLFGPTNFI VNSYLQGVGT MIDNFIPMAT YRGDEGWLSW WTVFFWGWFI GYGPMMAIFL
AKISRGYTIR KVVFSICIIA PLITCFWFTV VGGSGLAFEI ANPGSVSKAF EGFNLPGALL
AVTNQLPFPM VISILFLILT TIFIVTTGDS MTYTISVVIS GSTEPNAVIR IFWGIMMGIT
AIILISLGSG GVTALQSFIV ITAVPVSLIL LPSLWNGPQI AMKMAKAQGL
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