| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_0806 |
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| Symbol | |
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| ID | 6115040 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | + |
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| Start bp | 1089360 |
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| End bp | 1090688 |
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| Gene Length | 1329 bp |
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| Protein Length | 442 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 641632291 |
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| Product | diguanylate cyclase |
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| Protein accession | YP_001759196 |
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| Protein GI | 170725170 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2199] FOG: GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 33 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAAAGTCA CTAAGCGGTT AAAAATTTTA CTGATTCTTG GGTTAATGCT AACCGGAGGA
ATACTTTTTT CGTTAGTGAG CCTAAATGAC AATCAGGTGA GAACCAATCA GGAGCTACAC
CAAGTTATTG AGATTGAGCT TAAGATAAAT GAACTTGGGA CTCGGTTATG GCTACTCTTT
CAATATAATG ATCAAGATGC GTTAATACAG ACACGATATG CTCATCAGGA CTTAAAAGAG
CTGCTTGAGC AGGAGCAGTT TAATAATGAA AGCAAGAACA GCATCATTGC CAACTTAATC
AGGATGAACC TGAATATAGG CTCATTAATA GAGCTTTCAC AAAAAGATAT AGAGTCTAAG
TTTCAACCTA GTATAACCAC ATCAGCGGGC ATGCTATCTG CAAGATATAA TATGACGCTG
CAATCGATGA ATGAAGATCT GACCAAGCTA CAAAAGCTCG CCATGAGAGA TGCGGAGCTC
TCTCAACGTA AAATTCTTTA TGCTGTGGTG ATATTCCTGA CCTTAGGTTC AGTTCTCGTA
TTGATATTAA TCATAATGAC ACTGAGGACT TTTAAGGCAA ATCTTAATGT ACTGACCTTA
GGCATCAAAG ATCTGGAGAA GGGCAATTTA GGAAGTCGGC TTTTAGTCAG TGATACCGAC
GAACTGTCAG AACTTGCTGA GCAGTTTAAT CTGATGAAAC ACTCTTTAGA GACGACTACA
ATTAAAAAAG AGCAGCTACA GGAGGAGGTA GACAGACAGA CGGAAGAGTT GCAGAAGCAG
CGGGCGGATT TTCAGCTCCT TGCGAATTAT GACAGTTTAA CTCAGCTCTA TAGTCGCAGC
GCTTTTGAAT CTCAGATGAA GACTGCTATT GCCCGTTGTG GCCGTACTAA GCTTAATGGT
GCGCTTCTTT TTATCGATCT GGACAGGTTC AAACCTATTA ATGACAACTA TGGCCATTCT
GTGGGGGATA TTGTCTTAAT GCATGTATCT AAGATGCTTA CTCAAGCTGT GCGGACATCG
GACATTATTG CCAGAATTGG AGGGGATGAG TTTGTGATCT GGTTGGAGCC TATTGAGAAT
GCGCGCCAAG TGACTAAAGT GATAGAGAAG TTGCACTTAA GTTTATCAAC TCCCTTTAAG
TATGGGGATA TTAGTGTGAG TGTAAGTGCG AGTATTGGAG TTAGTTTTTA TCCTTTGGAT
GCAACTGATC TTAGTGGCTT ACTGAGAGTT GCAGATGACA ATATGTATAA AGCTAAAGCG
ACTCCTGATA CGTATTATTA CTTTACGCCA GAGGCAAATA GGCGATTTTC AATTACTAAG
TTAGCTTAG
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| Protein sequence | MKVTKRLKIL LILGLMLTGG ILFSLVSLND NQVRTNQELH QVIEIELKIN ELGTRLWLLF
QYNDQDALIQ TRYAHQDLKE LLEQEQFNNE SKNSIIANLI RMNLNIGSLI ELSQKDIESK
FQPSITTSAG MLSARYNMTL QSMNEDLTKL QKLAMRDAEL SQRKILYAVV IFLTLGSVLV
LILIIMTLRT FKANLNVLTL GIKDLEKGNL GSRLLVSDTD ELSELAEQFN LMKHSLETTT
IKKEQLQEEV DRQTEELQKQ RADFQLLANY DSLTQLYSRS AFESQMKTAI ARCGRTKLNG
ALLFIDLDRF KPINDNYGHS VGDIVLMHVS KMLTQAVRTS DIIARIGGDE FVIWLEPIEN
ARQVTKVIEK LHLSLSTPFK YGDISVSVSA SIGVSFYPLD ATDLSGLLRV ADDNMYKAKA
TPDTYYYFTP EANRRFSITK LA
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