| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_0787 |
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| Symbol | |
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| ID | 6115021 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | + |
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| Start bp | 1067954 |
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| End bp | 1068775 |
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| Gene Length | 822 bp |
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| Protein Length | 273 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 641632272 |
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| Product | uroporphyrin-III C-methyltransferase |
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| Protein accession | YP_001759177 |
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| Protein GI | 170725151 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0007] Uroporphyrinogen-III methylase |
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| TIGRFAM ID | [TIGR01469] uroporphyrin-III C-methyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.464331 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGATGTAG TAACGTTACC CGGTCAAAGA GCTGGTGGAA AAGTATGGTT AGTCGGAGCA
GGGCCCGGTG ATGTCGAGCT GTTAACGCTT AAGGCATATC GGATCTTAAA GAGTGCCGAT
GTGGTACTTT TTGATGCGCT CGTCAGTGAT GAAATCATGA GTCTTGTCCC ACAAGATGCT
GAAAAAATTG CGGTGGGAAA GCGTGCGGGT AAACATAGCG CGGCTCAAGA TGAGATCAAT
CAGCTGTTGG TCACTAAAGG CTTTACACGT AAAAATGTGG TGCGTTTAAA GGGAGGCGAC
CCCTTTATTT TTGGCCGTGG TGGTGAAGAA CTACAGAGCT TGGTTGAAGC AGGTCTTGAG
TTCGAAGTGG TTCCTGGAAT CACTGCAGCG AGTGGTACAT CTGCCTATGC TGGGATCCCG
CTAACTCACA GAGATTATGC TCAAGGTGTC TCTTTTATTA CTGGACACTG TCAGTTAGAG
AGCCGACCTA TGGATTGGAA GGGTTATGCT AATCCAAATA ATACCTTGGT CATCTATATG
GGCATTCTTA ATGCGGGACT AATCAAGTCT GGATTAATGG AAGCGGGTCG TAACGCCAAT
ACTCCCGTCG CTATTGTCTC TAAGGCTACA ACTGCCCAGC AAAAACGTTT TATCGGCACA
TTAGGCGAGT TGGACCTGTT AGCCTCTGAT CCAGAGCTTA AGATGCCCGC TTTGATGATC
ATCGGCGAAG TCGTTGAACT GGCTGACACT CTTAACTGGT TTGAGCCAAA AACGGAGAGC
GAACCGTTAG CCATTGGCGT TGAACTTAAA GATAGGCGTT AA
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| Protein sequence | MDVVTLPGQR AGGKVWLVGA GPGDVELLTL KAYRILKSAD VVLFDALVSD EIMSLVPQDA
EKIAVGKRAG KHSAAQDEIN QLLVTKGFTR KNVVRLKGGD PFIFGRGGEE LQSLVEAGLE
FEVVPGITAA SGTSAYAGIP LTHRDYAQGV SFITGHCQLE SRPMDWKGYA NPNNTLVIYM
GILNAGLIKS GLMEAGRNAN TPVAIVSKAT TAQQKRFIGT LGELDLLASD PELKMPALMI
IGEVVELADT LNWFEPKTES EPLAIGVELK DRR
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