| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_0722 |
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| Symbol | |
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| ID | 6114956 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | - |
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| Start bp | 988570 |
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| End bp | 989256 |
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| Gene Length | 687 bp |
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| Protein Length | 228 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 641632207 |
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| Product | phage shock protein A, PspA |
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| Protein accession | YP_001759112 |
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| Protein GI | 170725086 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG1842] Phage shock protein A (IM30), suppresses sigma54-dependent transcription |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.000273053 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 1 |
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| Fosmid unclonability p-value | 0.000000222893 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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| |
Sequence |
| Gene sequence | ATGGGCATAC TAAACAAGAT TATAACTGCT TTCCGTGGTG GTGCTACTGA AGTTGGCCAA
AGCATAGTTG ACGCTAACTC AACCCGTATC TTCGAACAGG AGATCCGTGA TGCAGAGAAC
CACTTAACTA AAGCTAAGCG TGAGCTAACT GACGTCATGG CAAAAGAGAT GCAAGCCAGC
CGTGAAGTTG ATCGCCTAAA GCGTTCAATC AGCGAACATG AAGGTTATGC AACTCAAGCT
CTTGAGAAAG AGAATGAAGC ACTAGCAATG GAAGTTGCAG AGAAGATCTC TCAACTAGAC
CAAGAGCTTG CTGAGCAGCA AAGTGCAAAC GCTAACTTTA CCGCTCACGC GACTCGTCTT
AAAGAGCTCG TGCGTAAAAC TGAGCGTCAA CTGACCGATT ACCAGCGTCA GCTAAGCATG
GTTAAGACCA CTGAAAGTGT TCAAAAAGCC ACTGCTAGCA TCACAGACTC TTTTGCAGGC
AGCAGCTCAA AGCTATTAAA CGCAAAAGAT TCGCTGGAGC GTATCAAGGC TCGTCAGCAG
CAGTTTGATG ACCGCCTTGT TGCCGCAGAG CAACTTGCCG ATGAAAACAG TGACAAGTCA
CTACATGATA AATTGGCTCA GGCTGGTATT GGTGAGCAGA AGTCTAACGC AAACGCGGTA
CTCGATCGCC TAAAAGCGCG TAAGTAA
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| Protein sequence | MGILNKIITA FRGGATEVGQ SIVDANSTRI FEQEIRDAEN HLTKAKRELT DVMAKEMQAS
REVDRLKRSI SEHEGYATQA LEKENEALAM EVAEKISQLD QELAEQQSAN ANFTAHATRL
KELVRKTERQ LTDYQRQLSM VKTTESVQKA TASITDSFAG SSSKLLNAKD SLERIKARQQ
QFDDRLVAAE QLADENSDKS LHDKLAQAGI GEQKSNANAV LDRLKARK
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