| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_0649 |
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| Symbol | |
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| ID | 6114883 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | + |
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| Start bp | 900032 |
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| End bp | 901051 |
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| Gene Length | 1020 bp |
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| Protein Length | 339 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 641632135 |
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| Product | PIG3 family NAD(P)H quinone oxidoreductase |
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| Protein accession | YP_001759040 |
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| Protein GI | 170725014 |
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| COG category | [C] Energy production and conversion
[R] General function prediction only |
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| COG ID | [COG0604] NADPH:quinone reductase and related Zn-dependent oxidoreductases |
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| TIGRFAM ID | [TIGR02824] putative NAD(P)H quinone oxidoreductase, PIG3 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.00556767 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 1 |
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| Fosmid unclonability p-value | 0.00000024095 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGTCTGCAC ACTCACTTCC ACAAAATTAT TTACACGTTA CTTTTGATGA ACCAGGAGCG
CCGGATGTTT TACATCTGAT TCGCTCTCAA CTACCTAAGA TTGAAGAGGA TCAGGTGTTA
ATTAGAGTGC ATGTGGCAGG CGTCAATGGT CCTGATCTGG CTCAGAGAAA AGGCGTTTAT
CCTGCACCAA CTGGCGCCAG CTCAATTTTA GGCTTGGAGG TTGCAGGTGA GGTGGTGGCA
CTAGGGTCAA AGGTCACTCG ATGGCAATTG GGAGAGAGGG TGTGTGCCTT GGTGCCCGGT
GGTGGCTATG GCGAATATGT GGCGACGTAT GCAGACCACT GTCTGCCGAT CCCTCATGGC
TGGCGCGACT CCGATGCCGC CGCAATTGTT GAGACCTTTT TTACGGTCTG GGGCAATCTA
TTTATGCGCG CTGGGTTGAA GGTGGGTGAG ACTGTATTGA TCCATGGTGG CTCTGGAGGT
GTCGGAAGTG CAGCCGTTGT CTTAGCTAAG GCATTTGGCG CTAAGGTTAT CACTACATCG
GGCAGTAATG AGAAGTGCGA GCATTGCGTA ACTCTAGGCG CCGAGCTTGC ACTTAATTAC
CGTAGTGATT TTGTTACTCC TGTTATGGAG CATACTCAAG GCAGAGGAGT TGATGTTGTA
TTTGATATGG CTGGTGGCGA TTTTATTAAT CAAAATTTAA AGGCCTTAGC TATGGATGGA
CGTATGGTAT CTGTAGCGAT GCAGAGAGGG GCTACAGCTG AAGTGGATAT TTTTCGGATC
ATGGCTAAGC GAATTCGTTG GACTGGGTCA ACACTGCGAC CTCAAAGCGT TGGGGCTAAA
GCTGAAATTA CCACTCAGTT GTTAGAGAGA GTTTGGCCCT TGTTAGATTG CGAGCTGGAG
AGTTCCACTC AACTTAAACC GCACGTTTTT GCAGAGTTTC CCCTTTATGA GTGTGCGAAA
GCTCACACCT TGATGGAGGC TGGAGAGCAT AGAGGTAAGC TAGTGTTGAG GGTGGAGTGA
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| Protein sequence | MSAHSLPQNY LHVTFDEPGA PDVLHLIRSQ LPKIEEDQVL IRVHVAGVNG PDLAQRKGVY
PAPTGASSIL GLEVAGEVVA LGSKVTRWQL GERVCALVPG GGYGEYVATY ADHCLPIPHG
WRDSDAAAIV ETFFTVWGNL FMRAGLKVGE TVLIHGGSGG VGSAAVVLAK AFGAKVITTS
GSNEKCEHCV TLGAELALNY RSDFVTPVME HTQGRGVDVV FDMAGGDFIN QNLKALAMDG
RMVSVAMQRG ATAEVDIFRI MAKRIRWTGS TLRPQSVGAK AEITTQLLER VWPLLDCELE
SSTQLKPHVF AEFPLYECAK AHTLMEAGEH RGKLVLRVE
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