Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swoo_0643 |
Symbol | |
ID | 6114877 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella woodyi ATCC 51908 |
Kingdom | Bacteria |
Replicon accession | NC_010506 |
Strand | + |
Start bp | 889452 |
End bp | 890219 |
Gene Length | 768 bp |
Protein Length | 255 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 641632129 |
Product | curli production assembly/transport component CsgG |
Protein accession | YP_001759034 |
Protein GI | 170725008 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1462] Uncharacterized protein involved in formation of curli polymers |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.0140532 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 0 |
Fosmid unclonability p-value | 0.000000015798 |
Fosmid Hitchhiker | No |
Fosmid clonability | unclonable |
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Sequence |
Gene sequence | ATGAAATACT TACTACCTCT AGTTGTCATC GGTCTGCTTT CAGGCTGTGG TCTGCTTCCT AAGCCGGAGC TAAATGTGAG TCAGGCTGAG CTCAATCCAG TGAGCGAGAC CATGTTAGCA CTGCAAGCGA AAAAGGGGCC TAAATACCCT ATTCCCGTTG CTGTGTATTC ATTTAGAGAT CAAACGGGGC AGTATAAGCC TCAGCAGAAT GTTAGCTCAT TTTCTACTGC GGTGACCCAA GGCGCGACCT CTATGCTAAT TCAGACGCTG CTGGACTCTC GCTGGTTTAC CCCTGTGGAA CGTGAAGGGT TACAAAACCT GTTAACTGAG AGAAAGATAA CCAAGAAGCA ACCTAAGAGT AAAGACTCAG AGGTGCCTCA ACTGACCAAT GCTCGCCTGT TACTTGAAGG TGGGATTATT AGTTATGAGA CAAATGTGAG TACTGGTGGT ATCGGCATGG AGTATTACGG TATCGGTGCT TCTGAGCTCT ACCGTGAAGA TCAAGTCACC ATCTACTTGA GAGCTGTCGA TGTGCACAGT GGAAAAGTGA TGATGTCGGT ATCGACCACT AAACGTGTGT TTTCTCAGGA GTTGAGAGCG GGTCTGTTTC GTTTTACTAG CTTAAACCGT TTGGCAGAAG CTGAGATGGG CTTTACAACT AATGAGCCTG TGCAGTTTTG TGTGCTACAA GCGATTGAGC TAGCGGTTGC AGAGATGGTC GATAAGGGGA TTGCGTTGGG ATATTGGAGT CCTAATTCTC AAAGTTAA
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Protein sequence | MKYLLPLVVI GLLSGCGLLP KPELNVSQAE LNPVSETMLA LQAKKGPKYP IPVAVYSFRD QTGQYKPQQN VSSFSTAVTQ GATSMLIQTL LDSRWFTPVE REGLQNLLTE RKITKKQPKS KDSEVPQLTN ARLLLEGGII SYETNVSTGG IGMEYYGIGA SELYREDQVT IYLRAVDVHS GKVMMSVSTT KRVFSQELRA GLFRFTSLNR LAEAEMGFTT NEPVQFCVLQ AIELAVAEMV DKGIALGYWS PNSQS
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