| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_0572 |
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| Symbol | |
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| ID | 6114806 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | + |
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| Start bp | 805073 |
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| End bp | 805993 |
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| Gene Length | 921 bp |
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| Protein Length | 306 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 641632058 |
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| Product | pseudouridine synthase |
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| Protein accession | YP_001758963 |
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| Protein GI | 170724937 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0564] Pseudouridylate synthases, 23S RNA-specific |
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| TIGRFAM ID | [TIGR00005] pseudouridine synthase, RluA family |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCTTCCT CAGTCCTTGC AACCCAAGCC TCCTATGTTG TGTTACCTGA ACATATTACC
GATAAACCGA CAGTACTCAG CTTTCTGGTT GAACGTTTTG CTCAGATTGA TGCTAGCGTG
TGGCAATCGA GAGTGGTTGA GGGAAAAGTA CATTGGCAAG ATGGAAGCTT GATTGAGCTT
GATACTCCCT ATAGACCAAG AGCAAGAGTC TATTACTATC GTGAAGTGGT GAGTGAGACT
AAGGTGCCTT TCGATGAAGA GGTTATCTAT CAAGATGAGA GGATTATTGT CGCTTTTAAG
CCCCACTTTC TAGCATTGCA TCCAAGTGGG AATGTGATTA ATGAGTGTTT GGTTAATCGA
TTGAGGATTA AAACTGGATT AGAGACTATA GTGCCTGCTC ATAGGCTTGA TAGGGCGACA
GCGGGCCTAG TATTACTCTG CCTGCATCCT GAGCATCGTC AAAGATACCA TGACCTGTTC
AAGTTTGGAC AGATCCGCAA AGAGTACCAA GCGCTGGCTA AACTGACACC TGAATTGCTA
CTGAAACATC AGCGTGGAGA GCTATCACTT CCACTTAATT GGACGGTGAA GAACCGTATG
GTGAAAGGGG AGCCCACATT CACCATGAGA GTGGCACCGG GGGAGCCAAA TACTCACTCA
GAGATCCAGT TGATTGAGAT AAACGGTGAG CTAGGTGTGT TTAATCTCTC TCCTATCACG
GGGCGCACTC ATCAGCTTAG GGTACATATG CAAAGCTTAG GCATGCCAAT CTTAAATGAC
AGATGTTACC CAGAGCTACA GCCTAAGGCC CCTGATGACT ACAGTAAGCC TCTTAAGCTT
TTGGCTAGGC GGCTTACCTT TACCGACCCC GTGAGTGGCC AGTTGATTAA ACTTGAGTGT
GATGCTTTAT CTTTATCTTG A
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| Protein sequence | MSSSVLATQA SYVVLPEHIT DKPTVLSFLV ERFAQIDASV WQSRVVEGKV HWQDGSLIEL
DTPYRPRARV YYYREVVSET KVPFDEEVIY QDERIIVAFK PHFLALHPSG NVINECLVNR
LRIKTGLETI VPAHRLDRAT AGLVLLCLHP EHRQRYHDLF KFGQIRKEYQ ALAKLTPELL
LKHQRGELSL PLNWTVKNRM VKGEPTFTMR VAPGEPNTHS EIQLIEINGE LGVFNLSPIT
GRTHQLRVHM QSLGMPILND RCYPELQPKA PDDYSKPLKL LARRLTFTDP VSGQLIKLEC
DALSLS
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