| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_0554 |
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| Symbol | |
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| ID | 6114788 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | + |
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| Start bp | 776525 |
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| End bp | 777874 |
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| Gene Length | 1350 bp |
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| Protein Length | 449 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 641632040 |
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| Product | outer membrane efflux family protein, putative |
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| Protein accession | YP_001758945 |
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| Protein GI | 170724919 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1538] Outer membrane protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 52 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAAAAA CTATCATTGC CAGTTTACTG CTTGCCTATA TGGCGGGTGG TGCACTGCAT
GTGCAGGCGG AAACAGCAGA CTCAAATTTA GCTGTAGAGC GCACAACTGC TGCATCTATA
ACGCAAAACT CTCAAACCCC AATAGCTCAA AGTGAAGCTA TGGCAGACTT TAGCGTTTGG
CTCCCTGAGC TAATGCAAGA TTTTAATGCC CTGCCTGAAG TTCGAGCTCA AGAAGCCAAG
CGTAAGCAGG CCAGCCTTAT GATCAAGGCA GCCGATCAAG CTGTGTACAA CCCAGAACTT
GGTCTAGGTT ATCAAAATGC CTCAGAAGAC ACTTACTCTC TTGATATAAG TCAGACCATA
GATTGGGGAG ATAAGCGTGG CGCCGCAACT CGCAAAGCCC AACTGCAAGC TGAAATTCTG
CTATCAGATA TTGCTCTAGA GCGGAGCCAG ATGTTGGCAA ATACGTTACT TGCACTGGTC
GAGCAGTCAC AGGCGAGTAA GGCGTTAGCG TTTCAAAAGC AGCAGTTGGT ATCGGCGAAG
ACTCAGTTAA AGATAGCGGT GCAGCAGATG GAGCTGGGCG ATCTGTCTGC GGTTGAGCTG
CAGCTTATCC AGCTTGATGT TGCCAGTAAG GCGGCAGATT ATGCGGTTGC TGAGCAGGCC
TCAATCACGG CTGATGCGGA TGTGTTGATG TTATTAGGCA GTAGCGAACT GCCTTTTAAC
GGCTTCTTAG GTGCGTTGAC AACCTCCCTT GTTTCTAAAC AGGTTAGCCC ACAACTGCCT
GCGCTGAAGA GTGCGTATCA ACAGGTGTTA CTGGCTAAAG TGGCTGCCCA GCAGGTGAAA
GCGGATACCT CCGCCGACCC AACCATCAGC TTGAGTGCTG AGCGTGAAGG TGAGGAGAAT
AAGCTAGGGG TGGGCTTATC AATTCCACTG CAGATCCGTA ATAACTACAG CGATACCTTG
GCCGTTGCAG GTCAGGAGAT CGCTGTTGCC GAGCAGAGTT ATCTAGCACG TGAACGCGTG
CTTACTCAGC AACAGAAAAA ATTCAATCTA AGTCTGCCAA GGCTCACGGA GCGCTATCAG
GAGTGGCGCG AGCTCGTGTT TCATTCGGGT CAGGAAGCAG CTTCAGCGCT GGGACAGCAG
TGGAAAGCGG GTGATATCAA CACCAGTGAC TACCTGCAGA GTCAGCGGCA ACTGTCGAGC
AGTTTCCTCG CGGGCTTGTC ACTGGAGACG GCACTTTACT CGAGTTGGCT CGAGTGGATG
GGCGCCAGTG GTCAGCTAGA TAGCTTCCTT AGCGCTCAGC TGCCAGCGGA TTCAAGTGCG
ACTGCCAACA CCAGTACGCT TTCTCATTAG
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| Protein sequence | MKKTIIASLL LAYMAGGALH VQAETADSNL AVERTTAASI TQNSQTPIAQ SEAMADFSVW
LPELMQDFNA LPEVRAQEAK RKQASLMIKA ADQAVYNPEL GLGYQNASED TYSLDISQTI
DWGDKRGAAT RKAQLQAEIL LSDIALERSQ MLANTLLALV EQSQASKALA FQKQQLVSAK
TQLKIAVQQM ELGDLSAVEL QLIQLDVASK AADYAVAEQA SITADADVLM LLGSSELPFN
GFLGALTTSL VSKQVSPQLP ALKSAYQQVL LAKVAAQQVK ADTSADPTIS LSAEREGEEN
KLGVGLSIPL QIRNNYSDTL AVAGQEIAVA EQSYLARERV LTQQQKKFNL SLPRLTERYQ
EWRELVFHSG QEAASALGQQ WKAGDINTSD YLQSQRQLSS SFLAGLSLET ALYSSWLEWM
GASGQLDSFL SAQLPADSSA TANTSTLSH
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