Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swoo_0515 |
Symbol | |
ID | 6114749 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella woodyi ATCC 51908 |
Kingdom | Bacteria |
Replicon accession | NC_010506 |
Strand | + |
Start bp | 729274 |
End bp | 730209 |
Gene Length | 936 bp |
Protein Length | 311 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 641632002 |
Product | Ppx/GppA phosphatase |
Protein accession | YP_001758907 |
Protein GI | 170724881 |
COG category | [F] Nucleotide transport and metabolism [P] Inorganic ion transport and metabolism |
COG ID | [COG0248] Exopolyphosphatase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.0265518 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCAACAA CACCTCTTTA TGCGGCGATC ACATTAGGAT CGAATAGTTT CAATATGTTG GTTGCCAAAA CACTTGGTGG CCGACCTGAA ATTATCGCGA AATATAAGCG AAAAGTCCGG CTTGCTGAAG GGATCCAAAG TGATGGTTCC CTGAGTGAAG AGGTGATGTT GCGTGGCCTT GATTGCTTAT CTATGTTCAG TGACATGCTG AAGAAAGAGG GCGTATCAGT AGATAATATC GCCGTTATTG CCACTGCAAC CCTTAGACAT ATTGCTAATT CCGATGAGTT TTGTCGTCGA GCCCTTCCCA TTTTAGGTCA CCCAATCGAG ATCATCTCCG GCATGCGTGA AGCTGAGTTA ATCTACCAAG GTATGGTTGC TACTACTGAG GGAGAGGGGC GCCGCCTAGT GATTGATATT GGTGGCGCGA GCACTGAGTT TATTATCGGT GACGGCGATA AGGTGCTGTT GAAAACCAGT CTACCTATGG GCTGTGTTAC CTTTAATGAT AAGTTTTTTA CCTCTTTTCC CTTCCAGAAA TTAGATTTTG ATGATGCTAA AGCAGCGGTA AAGTCTGCCC TGGGTGATTA TCTGAGTGAG CTTAAGCACT TAGGTTGGCA CTGTGTTGTA GGCGCTTCTG GCAGTGTGCA ATCAGTGGTG GAACTGCTTA ACTATAGGCA AGAGCCAGCT AGCATCACAT TAGATGTATT GACCTCACTG CAAGAGGAGG TGTTAACCCA ATCTAGCCCC TCTATGTTAT CTATTTCTGG CCTTCATCAG GAGAGAGCGC CAACTTTTGC TGCTGGGATC TCAATCTTGC TTGCCCTGTT TGAACTGTTA GAGATTGAGA GTTTGAACCT ATCTGGCGGT GCCCTCAGAG AAGGGGTATT GCAGACATTA GCTCAACGTA TTGAGCAGGT TGCTGACAGT GCCTAA
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Protein sequence | MPTTPLYAAI TLGSNSFNML VAKTLGGRPE IIAKYKRKVR LAEGIQSDGS LSEEVMLRGL DCLSMFSDML KKEGVSVDNI AVIATATLRH IANSDEFCRR ALPILGHPIE IISGMREAEL IYQGMVATTE GEGRRLVIDI GGASTEFIIG DGDKVLLKTS LPMGCVTFND KFFTSFPFQK LDFDDAKAAV KSALGDYLSE LKHLGWHCVV GASGSVQSVV ELLNYRQEPA SITLDVLTSL QEEVLTQSSP SMLSISGLHQ ERAPTFAAGI SILLALFELL EIESLNLSGG ALREGVLQTL AQRIEQVADS A
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