Gene Swoo_0481 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwoo_0481 
Symbol 
ID6114715 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella woodyi ATCC 51908 
KingdomBacteria 
Replicon accessionNC_010506 
Strand
Start bp667956 
End bp669107 
Gene Length1152 bp 
Protein Length383 aa 
Translation table11 
GC content43% 
IMG OID641631969 
Productprotein of unknown function DUF513 hemX 
Protein accessionYP_001758874 
Protein GI170724848 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG2959] Uncharacterized enzyme of heme biosynthesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones39 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACAACA AAGAATTAGA TGAAAACTTG CAAGAGCCTA AGAGAGAGAT TGTCTCAGAA 
GAGAAGGCTC AAGCTTTAAA CATATCCAAG AGCACAGATG AGACATCATC ACCCACTCCC
CAATCAGATA GTCGCAGTTC AGGCGTCTCT TGGGGGTTTC TGTTTAACTT AGTTCTAATC
TTACTATTAA CCTTTGTGAC CTTAGGTGGC GGCTACTATC TGCACCAAGA GCTTACTAAG
CAGACTGACA GAGCACAGAA TCTAGCTCAA GAGTTAAGGC TTGCACTTAA AGAGCCTTCC
AACCAGATAT CCAGACTTGA CCAAGAGCAA CGTCAAGCAC AAGCTCAACT CAGCCAAGAG
TTAGAAAACC TTAACGCCAC CCAGTTAAAA CTTAACGATC GCGTGGCTAA ACTGGCTCAA
AGAAATCCAA ATCACTGGAT GGCAGAGGAA GCAAAATACC TAGTTAGAAT GGCTGGCAGC
AAATTATGGT TAGAAAAAGA TCCCAGCACA GCGGTCAGCT TACTGAAGGC TGCCGATCAA
AGAATAGAAT CGATGAAAGA CCCATCCCTA ACGCCATTGA GAAAAGCGTT AGCTCAGGAT
ATTGCGCAAG TCTCCGTCAT TAAAAGTACT GATATCGCAG GTACAGTATT GATGTTAGAT
AGCATGATTG AAAATCTGGA CAAGCTACCA CTCAACCGAG CCGATTTAAT CAATGCAGCA
AACATGGTCG ATAATAGCAA GATGACTGAA TCGATCGATG ACTGGCAGAG TAACTTGGCC
AAGTCATGGC AAGCCCTGAT GGACGACTTT GTTGTGGTAC GCAAACGAAC CACAGATGTT
ACCCCCCTAT TAAAGCCTGA TGAGCAGTGG TATCTAGTCG AAAATATTAG AAATAAACTA
CTTCAATCTC AACTTGCACT TTACCGTCAA GATGAGGTCA ACTATCGTCA GTCACTGACT
TTGGCTAGGA AGTGGATCTA CCAATATTTC GATCTGAAGA ACACTCAAAC TGAGGAGGCA
TTAGCCGCAT TAGATGCACT AAGCACCCTT GAGATTCAAA CACCTAAGAT CCAACAGTTT
TCATCAACCC CACTTCTTCA GCAGCTTGTT ATCCATGGTA ATTTGATGAT ATCTGAGGAG
CCTTCACTAT GA
 
Protein sequence
MDNKELDENL QEPKREIVSE EKAQALNISK STDETSSPTP QSDSRSSGVS WGFLFNLVLI 
LLLTFVTLGG GYYLHQELTK QTDRAQNLAQ ELRLALKEPS NQISRLDQEQ RQAQAQLSQE
LENLNATQLK LNDRVAKLAQ RNPNHWMAEE AKYLVRMAGS KLWLEKDPST AVSLLKAADQ
RIESMKDPSL TPLRKALAQD IAQVSVIKST DIAGTVLMLD SMIENLDKLP LNRADLINAA
NMVDNSKMTE SIDDWQSNLA KSWQALMDDF VVVRKRTTDV TPLLKPDEQW YLVENIRNKL
LQSQLALYRQ DEVNYRQSLT LARKWIYQYF DLKNTQTEEA LAALDALSTL EIQTPKIQQF
SSTPLLQQLV IHGNLMISEE PSL