Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swoo_0481 |
Symbol | |
ID | 6114715 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella woodyi ATCC 51908 |
Kingdom | Bacteria |
Replicon accession | NC_010506 |
Strand | - |
Start bp | 667956 |
End bp | 669107 |
Gene Length | 1152 bp |
Protein Length | 383 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 641631969 |
Product | protein of unknown function DUF513 hemX |
Protein accession | YP_001758874 |
Protein GI | 170724848 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG2959] Uncharacterized enzyme of heme biosynthesis |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 39 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGACAACA AAGAATTAGA TGAAAACTTG CAAGAGCCTA AGAGAGAGAT TGTCTCAGAA GAGAAGGCTC AAGCTTTAAA CATATCCAAG AGCACAGATG AGACATCATC ACCCACTCCC CAATCAGATA GTCGCAGTTC AGGCGTCTCT TGGGGGTTTC TGTTTAACTT AGTTCTAATC TTACTATTAA CCTTTGTGAC CTTAGGTGGC GGCTACTATC TGCACCAAGA GCTTACTAAG CAGACTGACA GAGCACAGAA TCTAGCTCAA GAGTTAAGGC TTGCACTTAA AGAGCCTTCC AACCAGATAT CCAGACTTGA CCAAGAGCAA CGTCAAGCAC AAGCTCAACT CAGCCAAGAG TTAGAAAACC TTAACGCCAC CCAGTTAAAA CTTAACGATC GCGTGGCTAA ACTGGCTCAA AGAAATCCAA ATCACTGGAT GGCAGAGGAA GCAAAATACC TAGTTAGAAT GGCTGGCAGC AAATTATGGT TAGAAAAAGA TCCCAGCACA GCGGTCAGCT TACTGAAGGC TGCCGATCAA AGAATAGAAT CGATGAAAGA CCCATCCCTA ACGCCATTGA GAAAAGCGTT AGCTCAGGAT ATTGCGCAAG TCTCCGTCAT TAAAAGTACT GATATCGCAG GTACAGTATT GATGTTAGAT AGCATGATTG AAAATCTGGA CAAGCTACCA CTCAACCGAG CCGATTTAAT CAATGCAGCA AACATGGTCG ATAATAGCAA GATGACTGAA TCGATCGATG ACTGGCAGAG TAACTTGGCC AAGTCATGGC AAGCCCTGAT GGACGACTTT GTTGTGGTAC GCAAACGAAC CACAGATGTT ACCCCCCTAT TAAAGCCTGA TGAGCAGTGG TATCTAGTCG AAAATATTAG AAATAAACTA CTTCAATCTC AACTTGCACT TTACCGTCAA GATGAGGTCA ACTATCGTCA GTCACTGACT TTGGCTAGGA AGTGGATCTA CCAATATTTC GATCTGAAGA ACACTCAAAC TGAGGAGGCA TTAGCCGCAT TAGATGCACT AAGCACCCTT GAGATTCAAA CACCTAAGAT CCAACAGTTT TCATCAACCC CACTTCTTCA GCAGCTTGTT ATCCATGGTA ATTTGATGAT ATCTGAGGAG CCTTCACTAT GA
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Protein sequence | MDNKELDENL QEPKREIVSE EKAQALNISK STDETSSPTP QSDSRSSGVS WGFLFNLVLI LLLTFVTLGG GYYLHQELTK QTDRAQNLAQ ELRLALKEPS NQISRLDQEQ RQAQAQLSQE LENLNATQLK LNDRVAKLAQ RNPNHWMAEE AKYLVRMAGS KLWLEKDPST AVSLLKAADQ RIESMKDPSL TPLRKALAQD IAQVSVIKST DIAGTVLMLD SMIENLDKLP LNRADLINAA NMVDNSKMTE SIDDWQSNLA KSWQALMDDF VVVRKRTTDV TPLLKPDEQW YLVENIRNKL LQSQLALYRQ DEVNYRQSLT LARKWIYQYF DLKNTQTEEA LAALDALSTL EIQTPKIQQF SSTPLLQQLV IHGNLMISEE PSL
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