| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_0465 |
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| Symbol | |
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| ID | 6114695 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | - |
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| Start bp | 577233 |
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| End bp | 580310 |
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| Gene Length | 3078 bp |
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| Protein Length | 1025 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 641631949 |
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| Product | acriflavin resistance protein |
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| Protein accession | YP_001758858 |
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| Protein GI | 170724832 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0841] Cation/multidrug efflux pump |
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| TIGRFAM ID | [TIGR00915] The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.471269 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGCTTTA CTGATATCTT TATTCGCAGG CCGGTACTCG CCGCCTCGAT AAGCTTCCTA
CTGCTACTCC TTGGCTTTAA CTCCATGAGT AGCATGCAGG TGCGTGAATA TCCCGAGATG
ACCAATACTG TGGTCACCGT CTCCACCAGC TACTATGGCG CCGATGCAAA TCTTATTCAG
GGCTTTATTA CTCAGCCCTT AGAGCAAGCA CTGGCTCAGG CTGACAACGT CGACTTTATG
ACCTCAGACA GCTCTCTGGG CACCTCCAAG ATCACTGTCT ATATGAAGCT CAATACCGAT
CCAAACGGTG CGTTGGCGGA TATTCTCGCC AAGGTTAACT CGGTACGCTC TCAACTGCCT
AAAGAGGCGG AAGACTCCAC CGTTGATATG TCCACAGGGT CTCAAACCTC AGTACTCTAT
ATCTCCTTCT ATAGTGACCA GATCAACTCT AGCCAGATAA CAGATTACCT AGAGCGAGTG
GTAAAGCCTC AGCTATTTAC CATCAACGGT GTGGCTAAAG TGAACCTCTA CGGTGGTATC
AAATATGCCA TGAGAATATG GTTAGATCCG GCACGTATGG GCGCGTTTAA CCTCTCATCA
AGCGAAGTGA TGCAGGTACT GCAAGCCAAC AACTACCAAT CGGCAGTAGG TCAGGCCAAC
GGTACATTTA CCCTCTTTAA TGGCACAGCA GATACTCAAG TTGCCACCGT TGAAGAGCTG
AAAAAACTAG TGATCGCCAG TAAAGATGGT CTTGTGGTTC GCTTAGGTGA TATTGCCGAG
GTGAGTCTAG ATAAGAGCCA CGATGTCTAC CGAGCATTGG CCGATGGTCA AGAGGCGGTC
GTTGTTGGAC TCGATGTCAC ACCAACCGCA AACCCGCTTA TCGTTGCCGA AGATGCCCGA
GAGTTGATGC CAGATATCCA GCGCAACCTC CCTGTATCGA TGAAAGCTCG TATTCTCTAT
GACTCCTCAT TGGCGATCGA TGAGTCCATC TCTGAGGTGA TCAAAACCAT AGGGGAAGCC
GCACTTATTG TTATTGTGGT TATTACTCTA TTCCTAGGGT CGCTGCGTGC TGTAATAATT
CCGATTGTCA CCATACCGCT TTCCCTCATT GGTGTTGCCG TCATCATGCA GATGTTTGGC
TTTACCTTAA ACCTGATGAC CCTACTTGCC ATGGTACTTG CTATCGGCTT AGTGGTGGAT
GATGCCATCG TGGTGGTGGA AAACGTCGAC CGGCATATTA AGCTCGGTGA AACTCCCTTT
AGAGCTGCCA TTATCGGTAC CCGTGAAATT GCAGTTCCGG TGATCTCCAT GACCATCACA
CTAGCAGCGG TTTATGCACC GATAGCCTTG ATGGGCGGAA TAACGGGCTC TCTATTTAAG
GAGTTTGCCC TTACTTTAGC TGGAGCTGTA TTTATCTCAG GGATCGTGGC ACTGACACTC
TCCCCAATGA TGTGCTCGAA AATCTTAAAG CCTCACTCGA CACCTAACCG TTTCGAGCAA
GGTGTTGAGC GCTTCCTCGA AGGGATGACA AACCGTTACC AGAGCATGCT CAATGCGGTG
ATGGAGCGTC GCCCTGTGGT TATCGCTTTT GCCTTTATTG TCTTCGCTAC CTTGCCTGTT
ATGTTCAGTT TTATCCCTTC AGAGCTAGCA CCAAACGAAG ATAAAAGTGT TGTGATGATG
ATGGGCACCG CGCCCTCAAC GGCTAACTTA GATTACATTC AATCTAATAT GACCTTAGTC
ACCGATATCA TTAAATCACA CCCTGAAAGT GATGCATCAT TGGCTTTTGT TGGAATACCA
AGCTCTAATC AGGCCTTCGG TATCGCTCCT TTAGTGCCTT GGAGTGAGCG CGATAAGAGC
CAAAAAGAGA TGCAGAAGAT TTTAGGTGAT GAGGTCAAGC AGATCCCAGG TATGGCAGTA
ACCACCTTCC AGATGCCTGA GCTTCCAGGT GCTTCTGGTG GCTTACCTAT CCAGTTTGTG
ATCACCACAT CAAACTCATT TGAAAGCCTG TTCCAGATAG GAAGCAGCGT ACTTGAGAAG
GTGCAAAATA GCCCACTGTT TGTCTACTCT GAGATCAACC TTAAATTTGA TTCCGGCACG
ATGAAGATCC ATATCAAGCG TGACCTTGCT GGCAGTTACG GCATCACAAT GCAAGATATC
GGGGTCACCT TAACCACCAT GATGAGTGAT GGTTATGTTA ACCGAATCAA CCTTGATGGC
CGCTCCTATG AGGTTATCCC ACAGGTTGAG AGACAGTTTC GAGACAACCC AGAGGCACTA
AACGGCTTCT ACGTTAAGGC TGCCGACGGT CGCTCCATTC CACTTGCAAG CTTAGTGGAT
ATCGAGATGG TTGCCGAGCC ACGTTCACTG CCTCACTTTA ACCAGATGAA TGCCTTAACT
GTGGGCGGGG TGGCCACACC GGGCGTAGCG ATAGGTGATG CTATCGACTT CCTAAAAAAT
ATAGGTGATA ACGACCTACC TAAGGGTTAC GACTATGATT TCCTAGGTGA AGCACGTCAG
TACGTCACTG AAGGTTCTGC GCTATTTGCG ACCTTTGGTT TGGCACTGGC TATCATCTTC
TTAGTCCTAG CAAGTCAATT CGAAAGCATC AGAGATCCTT TAGTAATACT GGTCTCTGTG
CCTCTGGCTA TCAGTGGCGC CTTAATCGCA CTGGCTTGGA CCCATGTCTT TGGTCTGTCG
TCGATGAACA TCTACACTCA GGTTGGACTT ATCACCTTAG TAGGACTCAT CACTAAACAC
GGGATCTTGA TGTGCGAGGT GGCCAAAGAG GAGCAGCTGC ATAATGGCCT CAGTAAAATG
GATGCCATTA AACTTGCGGC GACCGTTCGT TTACGTCCAA TCTTGATGAC CACTGCCGCC
ATGATTGCGG GCCTAATTCC GCTACTGTTC GCGGTTGGCG CAGGAGCTGT CGCTCGATTC
AATATCGGCT TAGTTATCGT ATCTGGCTTA GCCATTGGCA CAGTCTTTAC CCTGTTTGTT
CTGCCAGTTA TCTATACCTA TCTGGCAGAA AGGCATGAGC CTCTCCCTGA GTTTGATGAG
AAGTTAACGC TCAGCTAA
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| Protein sequence | MRFTDIFIRR PVLAASISFL LLLLGFNSMS SMQVREYPEM TNTVVTVSTS YYGADANLIQ
GFITQPLEQA LAQADNVDFM TSDSSLGTSK ITVYMKLNTD PNGALADILA KVNSVRSQLP
KEAEDSTVDM STGSQTSVLY ISFYSDQINS SQITDYLERV VKPQLFTING VAKVNLYGGI
KYAMRIWLDP ARMGAFNLSS SEVMQVLQAN NYQSAVGQAN GTFTLFNGTA DTQVATVEEL
KKLVIASKDG LVVRLGDIAE VSLDKSHDVY RALADGQEAV VVGLDVTPTA NPLIVAEDAR
ELMPDIQRNL PVSMKARILY DSSLAIDESI SEVIKTIGEA ALIVIVVITL FLGSLRAVII
PIVTIPLSLI GVAVIMQMFG FTLNLMTLLA MVLAIGLVVD DAIVVVENVD RHIKLGETPF
RAAIIGTREI AVPVISMTIT LAAVYAPIAL MGGITGSLFK EFALTLAGAV FISGIVALTL
SPMMCSKILK PHSTPNRFEQ GVERFLEGMT NRYQSMLNAV MERRPVVIAF AFIVFATLPV
MFSFIPSELA PNEDKSVVMM MGTAPSTANL DYIQSNMTLV TDIIKSHPES DASLAFVGIP
SSNQAFGIAP LVPWSERDKS QKEMQKILGD EVKQIPGMAV TTFQMPELPG ASGGLPIQFV
ITTSNSFESL FQIGSSVLEK VQNSPLFVYS EINLKFDSGT MKIHIKRDLA GSYGITMQDI
GVTLTTMMSD GYVNRINLDG RSYEVIPQVE RQFRDNPEAL NGFYVKAADG RSIPLASLVD
IEMVAEPRSL PHFNQMNALT VGGVATPGVA IGDAIDFLKN IGDNDLPKGY DYDFLGEARQ
YVTEGSALFA TFGLALAIIF LVLASQFESI RDPLVILVSV PLAISGALIA LAWTHVFGLS
SMNIYTQVGL ITLVGLITKH GILMCEVAKE EQLHNGLSKM DAIKLAATVR LRPILMTTAA
MIAGLIPLLF AVGAGAVARF NIGLVIVSGL AIGTVFTLFV LPVIYTYLAE RHEPLPEFDE
KLTLS
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