Gene Swoo_0438 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwoo_0438 
Symbol 
ID6114668 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella woodyi ATCC 51908 
KingdomBacteria 
Replicon accessionNC_010506 
Strand
Start bp538527 
End bp539327 
Gene Length801 bp 
Protein Length266 aa 
Translation table11 
GC content46% 
IMG OID641631922 
Productserine O-acetyltransferase 
Protein accessionYP_001758831 
Protein GI170724805 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1045] Serine acetyltransferase 
TIGRFAM ID[TIGR01172] serine O-acetyltransferase 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCTATG AAGTTTGGGA ACAGTTGAGA GTTGAAGCTG AAACTTTGGT TCAGAAGGAA 
CCACTATTGG CCAGTCACGT ATATTCATCT GTATTAAACC ATGAGTGTTT GGGTTCAGCG
TTAAGTTTTA TTGTGGCGAA TAAGCTCTCT GATGGCGTGG TTTCTCCTTT TACTTTTCGT
GAGCTGTTCG ACAAGGCATT TATTCATTGC GAACAGATGC TAACTAATGT CGCAACAGAT
ATTAAGGCGG TGAAAGAGCG AGATCCTGCG GTTGAAAGCT ACCTAACCGT TTTGCTAAAT
CTTAAAGGGT TTCAGGCTAT TCAAGTTCAC CGTTTGGCAA GTTGCTTATG GCACCAAGGC
CGAACTGAGC TGGCACAGTT TATTCAAAGC CGAAATTCAG AGGTATTTGG TGTTGATATC
CATCCCGCCT GTAAGATGGG GACGGGTATC ATGTTTGACC ATGCGACCGG AATTGTTATC
GGTGAAACAG CTGTGATTGA AAATAATGTT TCACTGCTTC AGGGCGTAAC GTTAGGTGGT
ACTGGTAACC AGCAGGGAGA TCGTCATCCG AAAATCCGTG CAGGTGTTTT AATTGGTGCA
GGCGCTAAGG TTTTGGGCAA TATCGAAGTC GGTGAGGGAG CGAAAGTTGG CGCGGGCTCA
GTCGTGTTAG CTGATGTAGA TGCTCATACG ACTGTAGTTG GTGTTCCGGC TAAAGTTGTC
GGCAAACCTG TATCTGCTTG CCCAGCTGAA ACAATGGATC AAACTTTTTA TGAGTCTGAC
GATTGCCAGC GTCAGTCATA G
 
Protein sequence
MRYEVWEQLR VEAETLVQKE PLLASHVYSS VLNHECLGSA LSFIVANKLS DGVVSPFTFR 
ELFDKAFIHC EQMLTNVATD IKAVKERDPA VESYLTVLLN LKGFQAIQVH RLASCLWHQG
RTELAQFIQS RNSEVFGVDI HPACKMGTGI MFDHATGIVI GETAVIENNV SLLQGVTLGG
TGNQQGDRHP KIRAGVLIGA GAKVLGNIEV GEGAKVGAGS VVLADVDAHT TVVGVPAKVV
GKPVSACPAE TMDQTFYESD DCQRQS