Gene Swoo_0433 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwoo_0433 
Symbol 
ID6114663 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella woodyi ATCC 51908 
KingdomBacteria 
Replicon accessionNC_010506 
Strand
Start bp535273 
End bp536193 
Gene Length921 bp 
Protein Length306 aa 
Translation table11 
GC content43% 
IMG OID641631917 
Productubiquinol oxidase, subunit II 
Protein accessionYP_001758826 
Protein GI170724800 
COG category[C] Energy production and conversion 
COG ID[COG1622] Heme/copper-type cytochrome/quinol oxidases, subunit 2 
TIGRFAM ID[TIGR01433] cytochrome o ubiquinol oxidase subunit II 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.984358 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.776593 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGTTAATTA GAAATTTAAG TAAGGCTGCA CTCACAGCAT CAGTAATCAT GATGTCTGGT 
TGTGAGGGGG GCGTGCTAGA TCCAAAAGGG CAAATAGGCA TTGATGAGAA ACACCTCATC
GTTGTCGCAA CCCTATTGAT GTTGATAGTG GTGATCCCCG TTATCTTCAT GACACTCTAT
TTTGCCTGGA AATATCGAGA TGGTCGTGAT CATGAAATCT TTGCCCCTAA ATGGGCGCAC
TCAAAAAGCA TTGAGATTAT TGTTTGGCTA GTACCTGTGG TGATTGTGAT TATTTTAGGC
GTCATTACAT GGGGCTCAAC CCACGATCTT GACCCCTATA AACCATTGGA ACATGAGGCT
AAACCAATAA CTGTTGAGGT GGTCTCACTA AACTGGAAGT GGTTGTTTAT CTATCCGGAA
CTTGGTATTG CATCGGTCAA TGAACTGGCA TTTCCCGCGA ATGTACCTGT GAATTTCAAG
ATCACCTCAG ATACGGCAAT GAACTCTTTC TTTATTCCTC AGTTGGGCAG TCAGATCTAT
TCAATGGCAG GTATGGCAAC TCAACTCCAT CTGATAGCGA ATGAGCCTGG CACCTTCGAT
GGTATCTCAG CTAACTACAG TGGAGCGGGT TTTGCGGGCA TGAAGTTCAA AGCTATCGCA
ACCGCAAATA CGCAAGAATT TGATACTTGG GTTGCTAAAG TTAAGCAACA AAAATATAAG
CTTGATAGAC AAAGTTATCA AGCATTAGCT AAACCAAGTG AAAACAATCC CGTCGAGTAT
TACGGCGAAG TCAGTCAAGG CATGTTTGAC CATATCGTGA TGCAATACAT GTATATGGGT
GATCCTATGC CTATGGATAA AAAAATAGAT ATGTCATCCC CTTCAGGGCA TTCCTCCTCT
AACCATTTGG AGATGGAGTA A
 
Protein sequence
MLIRNLSKAA LTASVIMMSG CEGGVLDPKG QIGIDEKHLI VVATLLMLIV VIPVIFMTLY 
FAWKYRDGRD HEIFAPKWAH SKSIEIIVWL VPVVIVIILG VITWGSTHDL DPYKPLEHEA
KPITVEVVSL NWKWLFIYPE LGIASVNELA FPANVPVNFK ITSDTAMNSF FIPQLGSQIY
SMAGMATQLH LIANEPGTFD GISANYSGAG FAGMKFKAIA TANTQEFDTW VAKVKQQKYK
LDRQSYQALA KPSENNPVEY YGEVSQGMFD HIVMQYMYMG DPMPMDKKID MSSPSGHSSS
NHLEME