| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_0429 |
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| Symbol | |
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| ID | 6114659 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | - |
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| Start bp | 531361 |
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| End bp | 532293 |
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| Gene Length | 933 bp |
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| Protein Length | 310 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 641631913 |
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| Product | protoheme IX farnesyltransferase |
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| Protein accession | YP_001758822 |
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| Protein GI | 170724796 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0109] Polyprenyltransferase (cytochrome oxidase assembly factor) |
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| TIGRFAM ID | [TIGR01473] protoheme IX farnesyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATATTC AAGGTCGGTT TATGTCTAAG CAGTGGCTGT CACGTTTAAA GGGATATGTT
CAGGTGATTA AGCCTGGCAT CATCATGGGA AATTTGATCT CCGTTACGGG GGGATTCCTG
TTAGCCGCCA AAGGTAGCGT AGACTTGACC TTGATGTTGA TGACAATATT AGGTTTGTCC
TTAGTCGTAG CATCAGGCTG CGGCCTTAAT AACTGTATCG ATAGGGACAT CGATGCCAAG
ATGCAGCGCA CCCGAAATAG AGTGACTGTC ACGGGTGAGA TATCAGTATA TTCAGTGCTG
GTATTCAGTT TAGCTTTGGG CCTAATAGGC TTTGGTTTAT TGGCCATATT TACCAACAAG
ATTGCTCTGT TATTTGCCGT GATTGGTTAT CTGGTTTATG TGGGGATCTA TAGCCTCTAT
ATGAAACGAC ACTCTGTCTA CGGCACCTTA ATCGGCAGCT TTTCGGGAGC CGTGCCGCCG
GTAGTTGGCT ATTGTGCGGT CACAGGAGAG ATAGATACTG GCGCAGTCAT TTTACTCTTG
ATGTTTAGCT TGTGGCAGAT GCCTCACTCT TATGCCATTG CCATCTTTCG ATATAAAGAT
TATGCCGCAG CGAAAATTCC CGTGTTGCCC GTTGCCAAAG GGATGACTAG GGCTAAGCTG
CACATAGTAC TTTATATTGC CGTTTTTTCT TTAGTTAGCG CCTTGCTCCC CTTGGCAGGT
TACACAGGGA TCGCCTTTAT GGCAGTAACC TGTGCCACCA GCTTGTGGTG GCTTGGAATG
GCACTAAAAG GTTACCAACG TGATATCAAT CTTAATCAAT GGGCAAGGCA AGTGTTTGGT
TGCTCTATTG TAACCATTAC AGCTTTGAGT ATCGCTATGG CAATGGATTT TCAACTTGTA
GTACAGACAC CCCTACTAAC TTTGTCTAAC TAG
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| Protein sequence | MNIQGRFMSK QWLSRLKGYV QVIKPGIIMG NLISVTGGFL LAAKGSVDLT LMLMTILGLS
LVVASGCGLN NCIDRDIDAK MQRTRNRVTV TGEISVYSVL VFSLALGLIG FGLLAIFTNK
IALLFAVIGY LVYVGIYSLY MKRHSVYGTL IGSFSGAVPP VVGYCAVTGE IDTGAVILLL
MFSLWQMPHS YAIAIFRYKD YAAAKIPVLP VAKGMTRAKL HIVLYIAVFS LVSALLPLAG
YTGIAFMAVT CATSLWWLGM ALKGYQRDIN LNQWARQVFG CSIVTITALS IAMAMDFQLV
VQTPLLTLSN
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