| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_0406 |
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| Symbol | |
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| ID | 6114636 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | + |
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| Start bp | 501352 |
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| End bp | 502440 |
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| Gene Length | 1089 bp |
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| Protein Length | 362 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 641631891 |
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| Product | branched-chain amino acid aminotransferase |
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| Protein accession | YP_001758800 |
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| Protein GI | 170724774 |
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| COG category | [E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism |
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| COG ID | [COG0115] Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase |
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| TIGRFAM ID | [TIGR01123] branched-chain amino acid aminotransferase, group II |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCAAATAA ATTATAACTT AAAACCTGCG TTAGAGCGCC GTACTGAGCA GTTCGAGCCC
GAAACCAATG TTGGCTTCGG CAACCTCAGA ACCGATCATA TGTTTTTAAT GGATTATCGC
GACGGGGAGT GGTGTGATCC AAGGGTTGTT CCCTACGGGC CTTTTGAAGT TGCACCTGGT
GCAATCGCCC TACATTATGG CCAGTCAGTG TTTGAAGGTG CTAAGGCTTT TCAACATGAT
GATGGTGAGA TCTACACCTT CCGTTTAAAT AAGAATGCCG AGAGGCTTAA TCGCTCTGCC
GATATCTTAT GTATTCCGAG TTTACCTGAG TCAATGCAGC TTGCAGGCAT TAATGCCCTA
ATCGATGTTG ATAGACTCTG GTTCCCGATG CAAGAGGGAG CTTGCCTCTA TATCAGACCT
TTTATCTTTG CGACCGAAGA TAGGCTCTCT GTGAGTCCAA GCCAAGCCTA TACCTTCTGT
GTGATGTTGA GCCCGAGTGG CCCCTATTAT GCTGATGGTT TCGATAAAGC GATTCGTTTG
CTTATTAGTG AGCGTTTCCA TCGTGCGGTT TCCGGTGGAA CGGGGGCATC TAAAGCGGCG
GGTAACTATG CTGCATCACT GAAGGCGGGT AAAGCTGCTG CTGAATATGG TGCGGCTCAG
GTACTATACC TAGATGCTAC CAACAAGCAG ATAGAGGAGG TGGGTGCGAT GAATCACTTC
CATATCTTAA AAGACGGCAC AGTGATCATT CCAAGTTTTA CTGACACTAT TCTTAAATCT
ATTACCTCAC AGTCCATCTT GGAGCTTGGG GATATTTTAG GTTGCGAAGT GCGTCAAGAG
ACGGTGATGT TGGATAAGTT CATTAGTGAT ATTGAGTCCG GTGAAATTAT TGAAGCGGGT
GGTTTTGGTA CTGCTGCTGT TGTGTCGCCA GTAGGTTCCT ATATCTTTGA AGATAATAGG
GTAGTAACAG TGGGCGACGG TCAAGTTGGT GAGCATACTC GACGTCTATA CCAGGTGTTG
ACGGATATTC AGAAAGGCAA AGTTCAAGGT CCTGATGGCT GGATGCAGCA CGTAGCGCGC
ACTGTTTAA
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| Protein sequence | MQINYNLKPA LERRTEQFEP ETNVGFGNLR TDHMFLMDYR DGEWCDPRVV PYGPFEVAPG
AIALHYGQSV FEGAKAFQHD DGEIYTFRLN KNAERLNRSA DILCIPSLPE SMQLAGINAL
IDVDRLWFPM QEGACLYIRP FIFATEDRLS VSPSQAYTFC VMLSPSGPYY ADGFDKAIRL
LISERFHRAV SGGTGASKAA GNYAASLKAG KAAAEYGAAQ VLYLDATNKQ IEEVGAMNHF
HILKDGTVII PSFTDTILKS ITSQSILELG DILGCEVRQE TVMLDKFISD IESGEIIEAG
GFGTAAVVSP VGSYIFEDNR VVTVGDGQVG EHTRRLYQVL TDIQKGKVQG PDGWMQHVAR
TV
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