| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_0352 |
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| Symbol | |
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| ID | 6114581 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | - |
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| Start bp | 444768 |
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| End bp | 446672 |
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| Gene Length | 1905 bp |
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| Protein Length | 634 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 641631839 |
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| Product | LppC family lipoprotein |
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| Protein accession | YP_001758748 |
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| Protein GI | 170724722 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG3107] Putative lipoprotein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.184471 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGTTGAAAA GACTGAATAC AACTAAATTA ATCTCCGTTG CGGTTTTAAC CACAATTTTG
TTCGGTTGTG GGACTACGCC TACAAAAGTA GAGCCTGAAC AAAGCCAGAT CTCCTTAGTG
AGTGCTAGCC TGCAACCCGC AGACTACCTG AACAAAGCGG CTACTACAGA CAATCCTGAG
CGGCGAACAC GCTACCTATT ATTGGCATCT CACGCTTTCA TTAATGAAGG CGACGCAAAT
GCTGCCACTA AGACGCTCAA CTCTGTTGAA AAAGATTTAG GCCAAAATGT TGAGCTGCTT
GCTGAACATA AATACCTCAA AGCAAGAGTA TTAGAGCTAA CTTCAACCTA TGATGATGCT
TTACGTGAAC TTGAGTATCC AAGTAGTTGG AAGCTGGCAG ATTGGCAGAT GGTGGCTTAC
TACCAATTTA AGGCGCGCCT GTATCAACAT ATCAAGCAAC CAATAGAGCA AGCTAGGCAG
CTAAGTTTAC TCACAGCTTA TCTACCTACA GCCCAAGCTA ATGAAGTGAA TGACCAGATC
TGGCGTATCT TGCAGCCCTT GCATGAGCAA ACATTACTCG ACTTTAGCCA AGACTCACAA
ACACCTATTT TTGCAGGCTG GTTGCAACTT GCTTATATTG CCAAGCACTA TGCTATTAAC
CCGAGTGAGC TTGTTCAACA TCTTGGAAAC TGGCAACACG CAAATCCAAC CCATCCAGGC
GCTATCAAGC TGCCAACAGA TCTTGAAAAA GCGCTAAATG CTAAGCCCTA TCAGCCTAAG
AATATTGCAG TATTACTTCC TCTAAGTGGC AACAGAGCCT CTGTCGCCAA CATGGTTAAA
CAGGGGATAA TGTCGCGCTA CTTATCGAAT CCTGACAATC AAGTTTCAAT TAATTTTTTC
GATACAGCAA AGGGAGCACA GAGCGCTTAC CAAGCCGCTG TATCGGCTGG CGCTGAGTTT
ATTATCGGGC CTCTTTTCCA GTCTGAAGTC GAGCAACTTC AGCAAGCAAC ACCAATAGTG
TCTGAAACTC AGGTAGCACA AGTCGAAAGC TCAAGCATAG AAGCGGGCCA AATTGATGCT
CCTAAGCCAA GCTTTACTCC CAACATGGTG CCACAGCTTT ATCTGAATCA TGTCGATCAA
TTTACCCCCA ACGATGACAC CTTTTACTTC GCGCTTTCAC CGGCCAATGA AGCTAGTGAT
GCTGCTGATA AACTCTATGC TGACGGTATT GTTCACCCAC TCATTTTGGC TAGTAATAAT
GGCATAGGTA AAAGGATGGC AGAGAGCTTC AACAAGAGGT GGAATGAGCT GACCAACAAA
GATGCTGAAG TCCACTTTTA TGACGCTGGC GATAAGATGA AAGTCACAGT GCAGAAGTCA
CTTGGCGTTA TCGACAGCAA AGAGCGCATC GCCCGCATCA AAGCCTTAAT AGGTAATAAG
GTAGAAGCCG ACTTTAGATC CAGACGAGAT ATCGATGCCA TCTATATGAT CTCAGGTAAT
CGTGACCTTC CACTGTTAAA GCCCTTTATC GATGTTAATT TCAGTGTATT TGCAGAGCCT
GTTCCCCTCT ATGCTAGCAG TCGCAGCCGA GTTGAGGACA GCTCAAGGAA TACGGCTTTG
GAGCTCAACA ATTTAAATAT CAGCGATATA CCTTGGCTGT TAACCGACAG CCCTGAAGCA
CAACAGGTAC AGTCACTATG GCCAACCTGG AGTTATGGAC AAAAGCGCCT CTATATTATG
GGCTATGATG CACTCGAATT AGTCGGCAAG CTGGCTCAAA TGAGGGCTCT GCCTGGCTAT
CAGTTCTCAG GAAGAAGTGG CATGTTATCG GTCGCACCTG ACGGTACCGT TAACAGACAG
CTGAGCTGGG GACGCTATAA AAGAGGTAAT TTACGCCCTC AATGA
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| Protein sequence | MLKRLNTTKL ISVAVLTTIL FGCGTTPTKV EPEQSQISLV SASLQPADYL NKAATTDNPE
RRTRYLLLAS HAFINEGDAN AATKTLNSVE KDLGQNVELL AEHKYLKARV LELTSTYDDA
LRELEYPSSW KLADWQMVAY YQFKARLYQH IKQPIEQARQ LSLLTAYLPT AQANEVNDQI
WRILQPLHEQ TLLDFSQDSQ TPIFAGWLQL AYIAKHYAIN PSELVQHLGN WQHANPTHPG
AIKLPTDLEK ALNAKPYQPK NIAVLLPLSG NRASVANMVK QGIMSRYLSN PDNQVSINFF
DTAKGAQSAY QAAVSAGAEF IIGPLFQSEV EQLQQATPIV SETQVAQVES SSIEAGQIDA
PKPSFTPNMV PQLYLNHVDQ FTPNDDTFYF ALSPANEASD AADKLYADGI VHPLILASNN
GIGKRMAESF NKRWNELTNK DAEVHFYDAG DKMKVTVQKS LGVIDSKERI ARIKALIGNK
VEADFRSRRD IDAIYMISGN RDLPLLKPFI DVNFSVFAEP VPLYASSRSR VEDSSRNTAL
ELNNLNISDI PWLLTDSPEA QQVQSLWPTW SYGQKRLYIM GYDALELVGK LAQMRALPGY
QFSGRSGMLS VAPDGTVNRQ LSWGRYKRGN LRPQ
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