| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_0334 |
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| Symbol | |
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| ID | 6114563 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | - |
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| Start bp | 428073 |
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| End bp | 430616 |
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| Gene Length | 2544 bp |
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| Protein Length | 847 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 641631821 |
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| Product | 1A family penicillin-binding protein |
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| Protein accession | YP_001758730 |
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| Protein GI | 170724704 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG5009] Membrane carboxypeptidase/penicillin-binding protein |
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| TIGRFAM ID | [TIGR02074] penicillin-binding protein, 1A family |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAAGTGGT TTAAACGTAT AATTATTGCT CTATTCAGCC TAGCTCTTCT AGGCATTGCT
GCTATTGCTG CGGCTTATTT TTACGTGTTG CCAGAGTTGC CGGATGTCAA CACATTAAAG
ACAGTCAAAC TTCAAACTCC ACTACGAGTT TATAGTAGTG ACGGTAAGCT TATCTCTCAA
TTTGGTGAGA AAAGACGTAT CCCTGTGGCA TTTGATGATG TTCCCCCACA ATTGATTAAC
GCCGTTTTAG ATACTGAAGA TGCAAGGTTC TTTGAACACC ACGGTATTGA TCCTATTGGT
ATTACCCGCG CAGCATTTAT CCTTCTAACG ACAGGAAAAA AGAGCCAAGG TGCAAGTACC
ATAACCCAGC AGGTAGCAAG AGGGTTCTTT CTTACACGAG AAAAGACTTA TATACGTAAA
ATCAAAGAGA TATTCCTAGC AATCAAGATT GAAAAAGCCC TTTCTAAAGA GGAGATATTA
GAGCTATATC TCAACAGATC CTTCTTAGGA AATCGCGCTT ATGGCGTTGG CGCTGCTGCA
CAAGTGTACT ACGGCAAAGA GTTAGAGCAG CTAACCCTTC CAGAAATGGC GATGATTGCT
GGTTTACCTC AAGCACCATC AGCTGCAAAC CCAATACGAA ACCCTGAAAG AGCGACCAAC
CGACGCAATT GGGTGCTTAG CAGAATGCTC GAGAAAAATA ACATAACACA AGCACAATAT
GCTGCAGCAA CTCAGGCGCC AGTTACAGCT AAATACCATG GAGCAGAGAT AAACCTATAC
GCTCCCTACA TCTCCGAAAT GGCTCGCGAC TACTTAGTCG ATAAGTCTGG GGAGGAGGAA
GCTTATACTG GCGGCTATAA CATCTATACC AGCATCGACT CTCGCCTGCA GATCTACGCG
CAGGAAGCAC TAAGAGATAA TGTTTATGCA TACGATGAAA GACACGGCTA TCGTGGGCGC
ACTAAGGTCT TATGGACTGA TACGCCATTA GATACCGATT CAATTATTGC AAGACTCAAA
AAGACCAATG CCTTTCAAGG CATGGTACCT GCCGCGGTCC TTAGTGTTGA CGAACTCAGT
GCACAAGTAC TGACTTCTGA AGGTGAGGAG ATAAAAATCG AGTGGCCAGG ATTAAACTGG
GCCCGCAAAT TTATCACCAA TAAGCGCCAA GGTAAGGCAC CTAAAACAGC CACTCAAATC
TTGACTCCGG GCGAACAAGT ATGGGTGCGT AACAATGGTG AATTTTGGCA GCTGTCCCAA
ATCCCTAAAG TATCCAGTGC CATCGTATCT TTGGATCCCC ATGATGGTGC CATACGCACC
TTAGTCGGAG GTTTTAGCTT CCACACGAGT CAGTACAACA GAGTCACTCA GGCTAAGCGT
CAGTTAGGCT CCAATATTAA GCCTTTCATC TATACCGCTG CGATGGAGAA GGGCTACACC
TTAGCAACCT TAATCAATAA TGCACCTATT AATAAGCCTG ACACACGACA GGGAACTGCT
TGGCGACCAA AGAACTCTCC GGACAGATAC ACAGGGCCGA CACGACTCAA AATGGGATTA
GCTCAATCTA TTAATGTGAT GGCCGTTAGA GCTATTCGTT ACGCGAGCTT AGACACTGCC
ATCGAAACCT TGATTAGATT CGGCTTTGAT CCTGCCGATC TTCCTAAAAA CGAATCTGTC
GCTCTAGGTT CACCATCGGT GACACCATTG CAAGTTGTTA CCGCATTTTC TGTCTTCGCC
AATGGCGGCT ATAAAGTCGA GCCTTACTTT ATAGAACGTA TTGAAGATGC CTATGGTGAT
GTGATTGAGA AATCAAATCC AACGCTGGCT TGTACCCCAA CGCCTGCTGC TATCATTGAA
GAAACATCAG AGGTGGATCC GTTTGCCTCA ATGGCTGATG AGCTTCAAGC TGAGCCTGCA
ACACCACAAC CCATCTCTTT ATGTGGTAAC TCTGATAGCC GTTATGCGCC TCAAATAATC
TCCGAGCAGA CAGCTTTCCT CATCACTGAC GCACTTAAGA GTGTTATTTG GGGAGGAGGA
AATTGGAGTA AAGGCACCGG CTGGAATGGA ACAGCTTGGC GTGCTTCACG AGTGGTAAAG
AGACACGATA TTGCAGGTAA AACTGGTACT ACAAACGAAT CTCGCGATAC CTGGTTTAGT
GGGTTCAACC CAAGTTTAGC AACAACCGTT TGGGTTGGGT TTGATGATCA CAGCCAAGAG
TTGGGGAGAA CCAGTTGGAA TGCAAATGGG GCTAAGGATC AGATTTCAGC AGCTGAAGCC
GGAGCGAAAA CAGCAGGTCC TGCTTGGAAT GAGTTTATGA AAAATGCCCT TGCAGGCCAG
CCTGAAGTGC CAAGCTCTCC ACCAGATGGC ATCGTTTCAG TCAGAATTGA TTTAGCCACA
GGCAAACTCA GCCGCAAAAC AGATCACACA AGTAAGTTCG AATACTTTAT CTCAGGTACC
GAACCAACTG AATTTGCCCC CCAAGCTGAG GAGGAGTCTA ATGATATTTT CATCGATGAG
TCTCCTGAAG ATCTATTTCA GTAA
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| Protein sequence | MKWFKRIIIA LFSLALLGIA AIAAAYFYVL PELPDVNTLK TVKLQTPLRV YSSDGKLISQ
FGEKRRIPVA FDDVPPQLIN AVLDTEDARF FEHHGIDPIG ITRAAFILLT TGKKSQGAST
ITQQVARGFF LTREKTYIRK IKEIFLAIKI EKALSKEEIL ELYLNRSFLG NRAYGVGAAA
QVYYGKELEQ LTLPEMAMIA GLPQAPSAAN PIRNPERATN RRNWVLSRML EKNNITQAQY
AAATQAPVTA KYHGAEINLY APYISEMARD YLVDKSGEEE AYTGGYNIYT SIDSRLQIYA
QEALRDNVYA YDERHGYRGR TKVLWTDTPL DTDSIIARLK KTNAFQGMVP AAVLSVDELS
AQVLTSEGEE IKIEWPGLNW ARKFITNKRQ GKAPKTATQI LTPGEQVWVR NNGEFWQLSQ
IPKVSSAIVS LDPHDGAIRT LVGGFSFHTS QYNRVTQAKR QLGSNIKPFI YTAAMEKGYT
LATLINNAPI NKPDTRQGTA WRPKNSPDRY TGPTRLKMGL AQSINVMAVR AIRYASLDTA
IETLIRFGFD PADLPKNESV ALGSPSVTPL QVVTAFSVFA NGGYKVEPYF IERIEDAYGD
VIEKSNPTLA CTPTPAAIIE ETSEVDPFAS MADELQAEPA TPQPISLCGN SDSRYAPQII
SEQTAFLITD ALKSVIWGGG NWSKGTGWNG TAWRASRVVK RHDIAGKTGT TNESRDTWFS
GFNPSLATTV WVGFDDHSQE LGRTSWNANG AKDQISAAEA GAKTAGPAWN EFMKNALAGQ
PEVPSSPPDG IVSVRIDLAT GKLSRKTDHT SKFEYFISGT EPTEFAPQAE EESNDIFIDE
SPEDLFQ
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