| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_0296 |
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| Symbol | purH |
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| ID | 6114522 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | - |
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| Start bp | 365106 |
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| End bp | 366713 |
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| Gene Length | 1608 bp |
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| Protein Length | 535 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 641631780 |
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| Product | bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase |
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| Protein accession | YP_001758692 |
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| Protein GI | 170724666 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG0138] AICAR transformylase/IMP cyclohydrolase PurH (only IMP cyclohydrolase domain in Aful) |
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| TIGRFAM ID | [TIGR00355] phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATAATG CCAGACCCAT TCGTCGCGCG CTGTTAAGCG TTTCAGATAA AACCGGAATC
CTTGAGTTTG CTAAATCACT ACACGCTCAA GGCGTAGAGC TACTGTCTAC TGGTGGCACC
GCCCGCCTTT TGGCAGATAA TGGTGTGCCT GTCATTGAAG TGTCGGATCA TACTGGACAT
CCAGAGATCA TGGATGGCCG CGTTAAAACT CTGCACCCTA AAGTGCATGG CGGTATCTTG
GCACGTCGTG GCATCGATGA GCTTGTTATG GAACAAAATA ACATTAAGCC AATCGACCTA
GTTGCGGTTA ACTTGTATCC ATTTGCAGAA ACTGTCGCTA AAGAGGGCTG CACGCTCGCA
GACGCTGTCG AGAATATCGA TATCGGTGGC CCAACTATGG TCCGCTCTAC AGCCAAAAAC
CATAAAGACA CCACCATCAT AGTCAATGCA CATGATTACG ATCGCGTCAT TGCTGAGATG
GAAGCGAATC AAGGCAGCAC CACACTAGAA ACTCGCTTCG ACTTAGCGAT TGCCGCCTTT
GAACATACAG CCGCATACGA TGGCATGATC GCAAACTACT TCGGTACAAA AGTTCCTGCT
CACAGTCAAG ATGAGTGTCA TGAACGCTCT TTATGCGCTG AAGACTCTAA ATTCCCACGC
ACCTACAACA CTCAACTAGT TAAAAAACAA GATCTACGTT ATGGCGAAAA TAGCCATCAA
ACAGCCGCTT TCTATGTCGA TACAAATATA GATGAAGCTT CTGTTGCGAC AGCTGTTCAA
CTACAGGGCA AGGCGCTCTC CTATAACAAT ATCGCCGACA CAGACTCTGC ACTTGAGTGC
GTTAAAGAGT TCAGTGAACC TGCCTGTGTG ATTGTAAAAC ATGCCAACCC ATGTGGCGTA
GCCATTGGTG AAAACCTACT TGAAGCCTAC AACCGTGCAT TCCAAACCGA TCCTACCTCG
GCTTTTGGTG GCATTATCGC CTTCAACGCA GAGCTTGATG CTGAAACTGC AGCAGCGATT
GTTGAGCGTC AATTTGTAGA GGTCATTATC GCCCCTAAGG TTTGCCAAGC CGCTCGTGAT
GTTGTTGCAG CTAAGGCCAA TGTTCGCCTG CTTGAGTGTG GTGAATGGGC AAATAAGACC
ACCAGCCTTG ATTACAAGCG TGTTAACGGC GGGCTGCTGC TTCAAGATAG AGACCAAGGT
ATGGTTGGAC TTGATGAGGT GAAAGTCGTC TCTAAACGTC AACCAACTGA AGCTGAGATG
AAAGATCTAA TGTTCTGCTG GAAAGTCGCC AAATTTGTTA AGTCTAACGC GATTGTGTAT
GCAAAGAACA GCATGACAAT CGGTGTTGGC GCAGGCCAAA TGAGCCGTGT CTATAGCGCT
AAGGTGGCTG GTATAAAAGC TGCTGATGAA GGGTTAGAGG TGCAAGACTC AGTGATGGCA
TCTGATGCTT TCTTCCCGTT CCGTGATGGC ATTGATGCCG CAGCCGCTGC CGGCATCAGC
TGTATCATCC AACCAGGTGG CTCTATCCGT GATGAAGAGA TCATTGCAGC AGCAGATGAG
CACGGTATGG CGATGGTATT TACCGGAATG CGTCACTTCC GTCATTAA
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| Protein sequence | MNNARPIRRA LLSVSDKTGI LEFAKSLHAQ GVELLSTGGT ARLLADNGVP VIEVSDHTGH
PEIMDGRVKT LHPKVHGGIL ARRGIDELVM EQNNIKPIDL VAVNLYPFAE TVAKEGCTLA
DAVENIDIGG PTMVRSTAKN HKDTTIIVNA HDYDRVIAEM EANQGSTTLE TRFDLAIAAF
EHTAAYDGMI ANYFGTKVPA HSQDECHERS LCAEDSKFPR TYNTQLVKKQ DLRYGENSHQ
TAAFYVDTNI DEASVATAVQ LQGKALSYNN IADTDSALEC VKEFSEPACV IVKHANPCGV
AIGENLLEAY NRAFQTDPTS AFGGIIAFNA ELDAETAAAI VERQFVEVII APKVCQAARD
VVAAKANVRL LECGEWANKT TSLDYKRVNG GLLLQDRDQG MVGLDEVKVV SKRQPTEAEM
KDLMFCWKVA KFVKSNAIVY AKNSMTIGVG AGQMSRVYSA KVAGIKAADE GLEVQDSVMA
SDAFFPFRDG IDAAAAAGIS CIIQPGGSIR DEEIIAAADE HGMAMVFTGM RHFRH
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