| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_0229 |
|---|
| Symbol | |
|---|
| ID | 6114452 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella woodyi ATCC 51908 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010506 |
|---|
| Strand | + |
|---|
| Start bp | 280890 |
|---|
| End bp | 282257 |
|---|
| Gene Length | 1368 bp |
|---|
| Protein Length | 455 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 45% |
|---|
| IMG OID | 641631710 |
|---|
| Product | amidase |
|---|
| Protein accession | YP_001758625 |
|---|
| Protein GI | 170724599 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0154] Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 19 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACAATAA AAGATGAGAC CAAAAAACAG ATTCTACAAC TTCATCAGAA AGTAGACTTT
CAATACGGAC GGTCTACAGG TTTTTCAGAT TATCACGCAT ATCTGTATCA GAATAAACAG
GCTTCACATA AGCAAGTAGA CAACTTGTCT GAAGGCGATA TTAACAATCA AGTACTTTAC
GGCATGACGA TCGCAGTAAA AGATAATATC GAAGTGGCTG GCATGCCAAA TACGCTGGGT
AACAAAGCAT TGGCTGGCCA TATTCCTCAA CACGATGCCT GCATCATTAC TCGATTAAAA
GAAGCGGGGG CTGTGATCAA TGGTAAAGCC AACATGCATG AGTTGGCACT GGGTGTCACC
AACATCAACC CCTCCTATGG TCATGCGTTA AATGCTTACA ACCCTGAGTA CTTTGCTGGT
GGCAGCAGTG GCGGCACTGC AGTAGCTGTG GCACTGGGAT TGGCGGATGC TGGGATTGGT
ACTGACACCG GTGGTTCATC ACGCATACCT GCAGCACTCA ATGGCATTGT GGGTTTTAGG
CCGACAACCG GACGCTATCC AAATGATGGA TTAGGTCTGA TCTCTAAAAC CAGAGACACG
GCTGGTCCCA TGGCTAAAGA TGTCGATACT CTTGCGCGAC TTGATGCAGT GCTAGCGGGG
GAACCTTCGA TAGATTCGCT GCCATCTTTC CCACCTAAAA AGTTAAGGCT CGGGATCCCT
CGTGCTTATT TTTACGGTAA TACAGAGCCG GCTGTACTCG CGGCTGTTGA GGACGTGCTT
CAGGCGCTTG CAAAAGCTGG GGTGACACTA ATAGAGGTGG ATCCTCAAGG CATTGAAGCA
CTAAACCAAA GCATTAGCTT TCCGGTAGTG CTTTATGAAG CGAAGCAACA CATTCAAGAT
TATGTAGAGA AAGCCTTACC AGGCACAGCG ATTGAAGACT TTGCAGCACA GATATGCAGT
GGAGATGTCA AAAATCTTGT CGATAGTATT TTTAATCAAC CTATTCCAGA GCCTATGTAT
CAGGAAGCTA TCAACTCTTT CAGGCCCAAG TTACAAAGCT TATACCAAGA CTACTTTGAT
AAGCATCGCC TTGATGCCGT TATCTTTCCT GCGACTCCGT TAACCGCTCA AAAAATCACG
AATGATAACG ATCTTGTCAT ACTTAATGGC AGTGAAGAAC CCACCTTTAG TACTTATATC
AGAAATGCTG ATCCTGCCAG TAATGCGGGT ATTCCAGGAT TAGTGATCCC CATCGGTTTC
AACCCTGAAG GATTACCCAT TTCACTTGAG ATTGATGGCC CCGCCGGCTC TGACCGGCAA
GTGATCACCA TTGGGAAACT GATTGAAACA ATAATTAAAA ATTTATAA
|
|---|
| Protein sequence | MTIKDETKKQ ILQLHQKVDF QYGRSTGFSD YHAYLYQNKQ ASHKQVDNLS EGDINNQVLY
GMTIAVKDNI EVAGMPNTLG NKALAGHIPQ HDACIITRLK EAGAVINGKA NMHELALGVT
NINPSYGHAL NAYNPEYFAG GSSGGTAVAV ALGLADAGIG TDTGGSSRIP AALNGIVGFR
PTTGRYPNDG LGLISKTRDT AGPMAKDVDT LARLDAVLAG EPSIDSLPSF PPKKLRLGIP
RAYFYGNTEP AVLAAVEDVL QALAKAGVTL IEVDPQGIEA LNQSISFPVV LYEAKQHIQD
YVEKALPGTA IEDFAAQICS GDVKNLVDSI FNQPIPEPMY QEAINSFRPK LQSLYQDYFD
KHRLDAVIFP ATPLTAQKIT NDNDLVILNG SEEPTFSTYI RNADPASNAG IPGLVIPIGF
NPEGLPISLE IDGPAGSDRQ VITIGKLIET IIKNL
|
|---|
| |