Gene Swoo_0215 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwoo_0215 
Symbol 
ID6114438 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella woodyi ATCC 51908 
KingdomBacteria 
Replicon accessionNC_010506 
Strand
Start bp267937 
End bp268272 
Gene Length336 bp 
Protein Length111 aa 
Translation table11 
GC content41% 
IMG OID641631696 
Productethyl tert-butyl ether degradation EthD 
Protein accessionYP_001758611 
Protein GI170724585 
COG category 
COG ID 
TIGRFAM ID[TIGR02118] conserved hypothetical protein 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00587315 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGATCCGTA TAGCAATTAG TTACCCTAAA ACAAAAAACA ATAATCCCAC TGAACAGTTT 
GATATGGACT ATTATCGCGA GCGACATATG GCGCTCGTCG AGATTAATTA TCTGCCCCAC
GGCCTCATTA GGTGGGAACT GGACATCCCA CAAATAGGCT TAGGCGAACC CCCCGTATTT
GCGATTGGTT ACCTCTATTT TACCAACCTA CAAGAGATGA AAAACGCATT CAAACAAGCT
GGTTCTATCG TACTTGCTGA CATTATCAAT TTTACCAATG TCACTCCGAT TATCGTTGTT
AGTGAGATAA CAATAATGGG AGGTTCACAT GAATAA
 
Protein sequence
MIRIAISYPK TKNNNPTEQF DMDYYRERHM ALVEINYLPH GLIRWELDIP QIGLGEPPVF 
AIGYLYFTNL QEMKNAFKQA GSIVLADIIN FTNVTPIIVV SEITIMGGSH E