| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_0210 |
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| Symbol | |
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| ID | 6114433 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | - |
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| Start bp | 260273 |
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| End bp | 261265 |
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| Gene Length | 993 bp |
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| Protein Length | 330 aa |
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| Translation table | 11 |
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| GC content | 39% |
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| IMG OID | 641631691 |
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| Product | AraC family transcriptional regulator |
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| Protein accession | YP_001758606 |
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| Protein GI | 170724580 |
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| COG category | [K] Transcription |
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| COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 5 |
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| Fosmid unclonability p-value | 0.000249048 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGTCTTTTT TAATTAACGA CGGTTATAAA AAAATGACAT TGGATGTTGC GAGTTATGAA
AGGATTGATT ATTGGAGAGA GCAAATTTGC CATGAGTTTG TCCAGTTAGA CTGTGAGCCT
TTGAACAAGG ATCGCTTTCA CGGAGAGATT AGAGGGGGAC TTAATTTTGG ATTATTAAGC
GTCTCTGAAG TTCAAGGTGA AGCACAGATT GTCACCCGGA CGAAACAGCA AATAGCTCAC
TCCAGTGAAG CGTATTTTTT AATGAGCTTT CAACTTTTTC AACAAGGAGT GGTTAAGCAG
AATGGTCGAG AAGCCATATT ACAGCCCGGC AGTTTTACAC TCTATGATAG CAGTGAACCT
TATAGCCTCA CGTTTGAAAA AGAGTTTCAT CAACTGATTA TTCAGATGCC GAAACACGTA
CTGAGTCGTT ATTTAATCCA TCCTGAAAAG TATACCGCCG TCCCTCTTTC TGGCAAGGAA
GGTATTGGTG CAGTGCTCAG CAATTTCATT TTCTCAGTGG TTAAAGAGTA CAAAGAGTTA
GATACGATTC ATCCAGAACT CGTTGAAAAC TTCTTGAATA TGATTGCCAT GGCTTATTCT
TGCTCAGTTA TGCATAACAA GCTGAAGAAG AAAGCGCTTT CCAAAGATGC GTTAGTGGAG
CGAGTACTAA GCTACATTGA AAACAACTAT GCAAATCATC AACTATCAAA CCAACACATT
GCTGATGCCC ATGGGATCTC TTTGCGTTAT CTCTATAAAT TATTTCAAAA GCAAGAGCAC
ACTATTCATC AAATTATTCA AAAAAGAAGA TTAATGATGA GCCGACAATT GCTGCAAGAA
GACAGTAAAT TTGATTTCAG TTTAGATAGC TTATCTTACG CCGTTGGTTT TACCTCATCA
TCACATTTCT CGAGAGCCTT TAAAGATTAT TTCGGCGAAT GTCCTCGCGA TTTCAGACAG
AAAATTTTTC TCGAATCCAC GCGAGATAGT TAA
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| Protein sequence | MSFLINDGYK KMTLDVASYE RIDYWREQIC HEFVQLDCEP LNKDRFHGEI RGGLNFGLLS
VSEVQGEAQI VTRTKQQIAH SSEAYFLMSF QLFQQGVVKQ NGREAILQPG SFTLYDSSEP
YSLTFEKEFH QLIIQMPKHV LSRYLIHPEK YTAVPLSGKE GIGAVLSNFI FSVVKEYKEL
DTIHPELVEN FLNMIAMAYS CSVMHNKLKK KALSKDALVE RVLSYIENNY ANHQLSNQHI
ADAHGISLRY LYKLFQKQEH TIHQIIQKRR LMMSRQLLQE DSKFDFSLDS LSYAVGFTSS
SHFSRAFKDY FGECPRDFRQ KIFLESTRDS
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