Gene Swoo_0142 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwoo_0142 
Symbol 
ID6114365 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella woodyi ATCC 51908 
KingdomBacteria 
Replicon accessionNC_010506 
Strand
Start bp175197 
End bp175568 
Gene Length372 bp 
Protein Length123 aa 
Translation table11 
GC content45% 
IMG OID641631623 
Producthypothetical protein 
Protein accessionYP_001758538 
Protein GI170724512 
COG category[S] Function unknown 
COG ID[COG4994] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones47 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAAACAG GCTTAGAGCA ACAACTTATA GAGCTTGAGC TTTATCTGCT TAAGTCTGAA 
GTAAGATCTT CGGTAGAGGA GCTTGCTAGC TTGATCCACG ATGATTTTTT AGAGTTTGGT
GGCTCTGGAA TTCGCTTTGG CAAGGAGGAG GTATTGATGA GGCTGCCTAA AGAGAGGTGT
CCAGAGTTTT GCGCTACCGA CTTTGAGTTA AGGGTGTTAA CGCCAGATCT GGCACAACTA
CTTTATCGTG CATCCATGAT TAAACCCGAT GAGTTTATTA CCCGCTACTC TCTGCGCAGC
TCCCTTTGGA AGAGAAGTGG AGACAATTGG CAGATGATTT TTCATCAGGG CACGCCCTGT
GAAGCATTTT AA
 
Protein sequence
MQTGLEQQLI ELELYLLKSE VRSSVEELAS LIHDDFLEFG GSGIRFGKEE VLMRLPKERC 
PEFCATDFEL RVLTPDLAQL LYRASMIKPD EFITRYSLRS SLWKRSGDNW QMIFHQGTPC
EAF