| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_0141 |
|---|
| Symbol | |
|---|
| ID | 6114364 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella woodyi ATCC 51908 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010506 |
|---|
| Strand | + |
|---|
| Start bp | 174227 |
|---|
| End bp | 175144 |
|---|
| Gene Length | 918 bp |
|---|
| Protein Length | 305 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 46% |
|---|
| IMG OID | 641631622 |
|---|
| Product | LysR family transcriptional regulator |
|---|
| Protein accession | YP_001758537 |
|---|
| Protein GI | 170724511 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG0583] Transcriptional regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 48 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGAATTGGA GTCTGTACCA GCTGGAAGCT TTTGTTCTAT CGGTGAAATA TGGCTCGTTC
TCGGCGGCAG CAAGAAAGCT GGGGAGAGCA CAGTCACGAA TTAGCACTGC CATTGGTCAC
CTTGAAGATG ATCTGGGTTT TGAGCTGTTT GATCGAAGTG CCAGGCTTCC TGTTTTGACC
CCTTGCGGTG AAGATATGTT TATTGAGGCC CAAGCGGTAC TGCAGCAGTG CCAGCGTCTT
GAGTCCCGCG CTATGACGTT ATCAACGGGG CAGGAGATAA GCCTGACGGT TGCCATGGAT
GAGGCGGTGC CGATCAATGC ATTTGAGTCT CTGTTTGAGC AGGTATCGAT CAAGTTTCCA
CTGTTAAAGC TTACTATCAT CAATGGTTCA CAAGATGATA TTGGCTTGTG GGTTGATGAG
GGGAAGGCCG ATATGGGCAT CTTATTTCAC TCTCGCAACG AACTGCCTGA GTCGTTGGAA
TTTATGTCCA TTGGCCAGTT TAAACAGTCT TTGATTGTGT CGGTAAATCA TCCTCTTGCT
CAGTTTTCGG CACCTAAAAT TAAAGAGTTA AACCAGCACA GACAGCTAGT GATCCGTGAC
CGAATGGGAG ATAAGCAGGC AAAAGCACTC GCTGCTAACC ATTGGTATAT CGACAGCTAC
TACTATATGA CAGCTCTGGT TATTCGTGGA GTGGGTTGGG CGCTCGTTCC TGAGCATATC
GCTAATAGTG AGTGGTATTC AGATGACATT GTGACCCTAT CAACAGAGCA TATCCCCTCC
CCATTATTGG TTGAAATAGG CGTTGTTAAT CGGCGGGATC AAGCTTATGG TCCTGTAATG
GAGTGGATCT TTTTAGAAAT TGAGTCCATG TTTAAGAATA AAGTGAATAA TTACAGCAAC
AAGTCGGAAT CTCCTTAA
|
|---|
| Protein sequence | MNWSLYQLEA FVLSVKYGSF SAAARKLGRA QSRISTAIGH LEDDLGFELF DRSARLPVLT
PCGEDMFIEA QAVLQQCQRL ESRAMTLSTG QEISLTVAMD EAVPINAFES LFEQVSIKFP
LLKLTIINGS QDDIGLWVDE GKADMGILFH SRNELPESLE FMSIGQFKQS LIVSVNHPLA
QFSAPKIKEL NQHRQLVIRD RMGDKQAKAL AANHWYIDSY YYMTALVIRG VGWALVPEHI
ANSEWYSDDI VTLSTEHIPS PLLVEIGVVN RRDQAYGPVM EWIFLEIESM FKNKVNNYSN
KSESP
|
|---|
| |