Gene Swol_2562 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwol_2562 
Symbol 
ID4282291 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophomonas wolfei subsp. wolfei str. Goettingen 
KingdomBacteria 
Replicon accessionNC_008346 
Strand
Start bp2921974 
End bp2923014 
Gene Length1041 bp 
Protein Length346 aa 
Translation table11 
GC content43% 
IMG OID638139446 
Producthypothetical protein 
Protein accessionYP_755220 
Protein GI114568066 
COG category[S] Function unknown 
COG ID[COG3949] Uncharacterized membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGGTTATC TGGGGGCGGT AATTGGGGCG GGCTTTGCCT CGGGGCAAGA GATTATCCAG 
TTTTTTGTTG TCTATGGCAG TGATGGTTTA AAAGGTACGC TTCTGGCCAC CTTCGCTTTT
GCGCTATGTG GGGGAATGTT GCTTTATTTA GCCCATCGCC ATCAGGTATC CAATTATCAA
GATTTGCTGG CTGGTCTTAT GGGTAATAAA GGCGGAAAGC TAATTGACTG GCTACTGGCA
GCATTTTTGT TTCTGGGTAT CAGCACCATG TTATCTGCCA GTGGGGCGGT ATTTGAAGAA
CACCTTTATT TACCGAAAAG CCTGGGGATT TTGCTAACAT ATTTAATGGT TATATTCTTT
TTGTTCTCCG GTAAAAAAGG TTTAATATTC TCTTTTAATA TGCTGGTTCC CGTAAAAATC
CTTTTCTTGT TGCTCGTCAC CGGCTATGTA GTCTTTTTTA TGGAAAGCCA GGCACTGGGA
AGCTATAGTG TTTACCTCTG CCCGGTTAAT AGCAGGTTTT GGATAATATC CAGCATACTC
TATGTGGCTT ACAATTTTTC TTTAGCGATG GTGGTATTAA GTGAATACCA AAGCCTCAGC
AACTGCCGGG AAGGCATAGC TGGGGCTGCA TGGGGTGGGC TTATGCTGGG GATACTGGTG
GTACTGAGCT ACCTGTCTTT ATGCAAATTT TTACCGGCGA TTATGCACTA TGAAGTGCCC
ATGCTCTATC TTATGGGAAG AATATCGCCT GGGGTTAAAC AGTTCTATAC TCTGATACTA
TGGATTGGGA TACTAACTAC CGCCATAGCC AATGCTTATG GTTTTACTCA ACGCATAGCT
GACTTCTCCG GTTTAGGTTT CGGAAGTTGT CTGCTATTGT GTATGACCCT ATCTTTGCCC
CTGGCCATGC AGAGCTTTTC GTCCCTGGTA GGAAAGATTT ACCCGGTTTT TGGTTTACTG
GGGATAATAA TAATTTCCGT ATTGCTTTAC CAGGGTATAA AAGACATGGC ACTGCTCTTG
TATTATAATA TTAAGAACTA A
 
Protein sequence
MGYLGAVIGA GFASGQEIIQ FFVVYGSDGL KGTLLATFAF ALCGGMLLYL AHRHQVSNYQ 
DLLAGLMGNK GGKLIDWLLA AFLFLGISTM LSASGAVFEE HLYLPKSLGI LLTYLMVIFF
LFSGKKGLIF SFNMLVPVKI LFLLLVTGYV VFFMESQALG SYSVYLCPVN SRFWIISSIL
YVAYNFSLAM VVLSEYQSLS NCREGIAGAA WGGLMLGILV VLSYLSLCKF LPAIMHYEVP
MLYLMGRISP GVKQFYTLIL WIGILTTAIA NAYGFTQRIA DFSGLGFGSC LLLCMTLSLP
LAMQSFSSLV GKIYPVFGLL GIIIISVLLY QGIKDMALLL YYNIKN