Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swol_2162 |
Symbol | |
ID | 4283143 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Syntrophomonas wolfei subsp. wolfei str. Goettingen |
Kingdom | Bacteria |
Replicon accession | NC_008346 |
Strand | + |
Start bp | 2496841 |
End bp | 2498838 |
Gene Length | 1998 bp |
Protein Length | 665 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 638139042 |
Product | putative methyl-accepting chemotaxis sensory transducer |
Protein accession | YP_754824 |
Protein GI | 114567670 |
COG category | [N] Cell motility [T] Signal transduction mechanisms |
COG ID | [COG0840] Methyl-accepting chemotaxis protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAAGCA TTGGTTCCAG ATTAACGCTG TATATTAGTA TGGTGGTGCT GTTTTTTTGT GCTGGTTTAG GTTTCATATC TTATTTTTAT GCTTCCAAAG CCTTAATGGC TAACATTGAA CAAAGTGTGG TAGCCAAAGC CCAGGATGCT ACTAAACTGG TAGGCAGCGA GCTAGATAAC CATTTATCGG TAATGGAAAC TATTGCGGAA CAGCCAGAAA TTACTAGTAT GAAATGGGAA GAGCAGCGCC CCATTCTGGA GCAAGCCAAC AAAAGACTGG GTTATTTGAT GATGGGGGTT GCCGGGCTGG ATGGGCAGGT GCTCACAACT GCGGGTTCGA CCACCAACTT AAAGGATCGG GATTACTTTG ACCAGGCCCT GAAGGGCCAA TCCAGTGTTT CCGATCCTAT AGTCAGTAGA ATTGATGGTA ACACCATCGT AATGATGGTA AGCCCTATTC GTGGTACCGA GGGGGAAGTT ATCGGAGTCC TGGCGGCGGC ACTGGATGGT TTGATCTTGA GCCAAATAAT AGCCGGGGTA AATTTTAGTG ATAGCGGTTA TGCCTATATG CTGAACCGTC AAGGCCAGGT TATAGCCCAT CCTAAAGAGG AAATGGTAAT AGAACAATAT GATCCGATCG CAGAAGCGGA CAAGGATCCA AAACTCGCTC CCCTGGCTGC AATTGTAAAG AATATGTTGA AAGCTGAGTG TGGTTACGGT GAATACCTGT GGACTGACGG TACCAACAAA TTCATGGGCT ATGCCCCGGT GGAAAATACC GGTTGGTCGA TTGCTGTAAC CGCCCCCCAG GATGAAGTGC TGGCTGGCCT GAAAAGCATG ACAGTAGGGG TGCTGGTCGC TGCTCTTGTT TTTCTTCTCA TAGGCATCGC CCTGGCTACT TATCTGGGTA GAACCCTGGC CCAACCAATT AAAAATGTTG CCGGAAATGC ATCTCTGATT GCTGACGGAG ACTTGAGAGT AGAAATAGCT GCTGGAGCTC TTGCCCGCCA AGACGAGATA GGTCATCTGG CCAGTAGCCT GGATAATATG GTTCAAGGCT TGAGAAATAT GCTGCACGAA GTAGCCCTTA ACTCCCAGGA AGTAGCAGCC TCCAGTCAAG AGCTGGCCGC TTCGGGTGAA AACATAGCCT CAATTGTAGA GGAACTATCC GCTTCCACAG AAGAGATCGC GGCAGGTATA ACCAATATAT CTTCTGCAAC TGACGAAGTA AATGCCTCGG GCGAAGGGAT ATCATCTGCT TTATTGTTGG CCAGTAAGGA TGCAGAGCAG GGTGTTCTTC AAGCCCAAAG CATTGAAAAG AGAGCGGCGC GAATGCAAAA CGGAGCCCAG GATCATAAAA AGACCGCAGA AAATGTTTAT GGAACTATAA AAGAAAAACT TACTGCAGCC ATTGAAGAAG CCCGGGTGGT AGAACAAATA TCCGAGTTGG CAGAAAATAT ATCCGGTATT GCCAGCCAGA CTAATCTTCT GGCCCTTAAT GCCGCTATAG AAGCCGCCCG AGCCGGGGAA CAGGGCAAGG GCTTTGCCGT GGTAGCGGAA GAAGTAAGAA AACTGGCAGA AAACTCAGCC TCAGCGGTAG AGGGGATTCA AGGCATGACC GAACAGGTGC AAAGGTCTAT CGCTAATTTA ACCAACTATG CTGAAGAATT GCTGAATTTT ATTAATACCC AGATTATTGC CGATTATGGA GATATGGTTA CGATATGCAA GCATTACAAG AATGATAGCG ACATGTTTTT AAACCTAATC GAAAAAATAA AAAAACATAC CGAAGAAGTC CTGGCCTCAG TGGAAGACAT AAACCACAGC CTGGACTCTA CCGCTGGCAC CATAAGAGAC TCATCTGCCG GAGCCCAAAA AATAGCAGAG GCCAGCCAAA CAGCTGCTAT AGCAGCCACA GAAATAAGTG CCGCATCAGT TAGAATGGCA GAAAACGCCG AAAAGCTGAA CCTGCTTATT ACCCGCTTCA AGTTGTAG
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Protein sequence | MKSIGSRLTL YISMVVLFFC AGLGFISYFY ASKALMANIE QSVVAKAQDA TKLVGSELDN HLSVMETIAE QPEITSMKWE EQRPILEQAN KRLGYLMMGV AGLDGQVLTT AGSTTNLKDR DYFDQALKGQ SSVSDPIVSR IDGNTIVMMV SPIRGTEGEV IGVLAAALDG LILSQIIAGV NFSDSGYAYM LNRQGQVIAH PKEEMVIEQY DPIAEADKDP KLAPLAAIVK NMLKAECGYG EYLWTDGTNK FMGYAPVENT GWSIAVTAPQ DEVLAGLKSM TVGVLVAALV FLLIGIALAT YLGRTLAQPI KNVAGNASLI ADGDLRVEIA AGALARQDEI GHLASSLDNM VQGLRNMLHE VALNSQEVAA SSQELAASGE NIASIVEELS ASTEEIAAGI TNISSATDEV NASGEGISSA LLLASKDAEQ GVLQAQSIEK RAARMQNGAQ DHKKTAENVY GTIKEKLTAA IEEARVVEQI SELAENISGI ASQTNLLALN AAIEAARAGE QGKGFAVVAE EVRKLAENSA SAVEGIQGMT EQVQRSIANL TNYAEELLNF INTQIIADYG DMVTICKHYK NDSDMFLNLI EKIKKHTEEV LASVEDINHS LDSTAGTIRD SSAGAQKIAE ASQTAAIAAT EISAASVRMA ENAEKLNLLI TRFKL
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