Gene Swol_2062 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwol_2062 
Symbol 
ID4283250 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophomonas wolfei subsp. wolfei str. Goettingen 
KingdomBacteria 
Replicon accessionNC_008346 
Strand
Start bp2368383 
End bp2368682 
Gene Length300 bp 
Protein Length99 aa 
Translation table11 
GC content47% 
IMG OID638138944 
Productanti-sigma F factor antagonist (stage II sporulation protein AA) 
Protein accessionYP_754727 
Protein GI114567573 
COG category[T] Signal transduction mechanisms 
COG ID[COG1366] Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor) 
TIGRFAM ID[TIGR00377] anti-anti-sigma factor 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.360402 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGACATTA AAAAAACTCA GGAAGACCGC AAACTGACTA TAGCCTTGGC GGGACGGCTG 
GACAGCAATA GCGCTCCCCA GTTGGAAGCA GAGCTGAAAG AGAGCGTAGT CGATATAAAT
GATCTGGTTT TGGACTTTGC CGAACTGGTT TACCTTTCCA GTGCGGGGCT GCGCGTCATT
CTGGCGGCTC AGAAGCAGAT GAACAAGCAA GGCCGGATGG TGATTGTCAA GGTGAATGAG
ACCATCATGG AAATATTCGA AATCACCGGC TTTGTGGAGA TTATTACCAT AGAAAAATAA
 
Protein sequence
MDIKKTQEDR KLTIALAGRL DSNSAPQLEA ELKESVVDIN DLVLDFAELV YLSSAGLRVI 
LAAQKQMNKQ GRMVIVKVNE TIMEIFEITG FVEIITIEK