Gene Swol_2015 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwol_2015 
Symbol 
ID4283305 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophomonas wolfei subsp. wolfei str. Goettingen 
KingdomBacteria 
Replicon accessionNC_008346 
Strand
Start bp2309013 
End bp2309648 
Gene Length636 bp 
Protein Length211 aa 
Translation table11 
GC content47% 
IMG OID638138897 
Productintegral membrane protein 
Protein accessionYP_754681 
Protein GI114567527 
COG category[S] Function unknown 
COG ID[COG1971] Predicted membrane protein 
TIGRFAM ID[TIGR02840] putative sporulation protein YtaF 


Plasmid Coverage information

Num covering plasmid clones37 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGAGTATT TTCATATTCT CTTGTTTGCC CTGGCAGTGA GCAGTGACGG GTTTTTTGCC 
GGCATGGCCT ACGGTTTAAA GAAAATTAAG GTTCCCTTGG TTTCGCTGCT GGTTATAGCT
ATGGCCTCAG CTCTGGCCGT TAGCTTTTCC ATGTTATGTG GAAGAGGGCT GGCCGCCATA
TTCCCTTCTG ATTTTGCCAG TCGCCTGGGA GCGGTAATGC TGATGCTTAT CGGAGTTTGC
TTTTTGCTCT CTGCCTGTCG GGATAGAATA GAGAGTATGG ATGAGATAGG CGAAGAGCCC
CTTTTTAGCC TGAACATCAA GCCTTTGGGC ATAATCATAC ATATACTAAA AGAACCAGCC
CGGGCTGATT TTGATTTATC CGGTGAGATC AGCACCCGGG AAGCTTTTTT TCTCGGGCTG
GCTCTGGCTA TGGATGCACT GGGGGCAGGT ATCGGAGTGG CCCTCGCAGG TTTCAATATT
CTATTAACAG CCCTGGCTGT GGGTGTGTTA AAATTTATAC TAGTAAATTG TGGGTTGCAA
TTGGGAATTA AGATAAAAGC CGAGCGCTGG CAGCTAATTT CCTCCTTGAT ACCCGGCCTT
ATGCTGATAA GCCTGGGAAT TCTCGAAATA ATGTAG
 
Protein sequence
MEYFHILLFA LAVSSDGFFA GMAYGLKKIK VPLVSLLVIA MASALAVSFS MLCGRGLAAI 
FPSDFASRLG AVMLMLIGVC FLLSACRDRI ESMDEIGEEP LFSLNIKPLG IIIHILKEPA
RADFDLSGEI STREAFFLGL ALAMDALGAG IGVALAGFNI LLTALAVGVL KFILVNCGLQ
LGIKIKAERW QLISSLIPGL MLISLGILEI M