Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swol_2015 |
Symbol | |
ID | 4283305 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Syntrophomonas wolfei subsp. wolfei str. Goettingen |
Kingdom | Bacteria |
Replicon accession | NC_008346 |
Strand | - |
Start bp | 2309013 |
End bp | 2309648 |
Gene Length | 636 bp |
Protein Length | 211 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 638138897 |
Product | integral membrane protein |
Protein accession | YP_754681 |
Protein GI | 114567527 |
COG category | [S] Function unknown |
COG ID | [COG1971] Predicted membrane protein |
TIGRFAM ID | [TIGR02840] putative sporulation protein YtaF |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
|
Plasmid Coverage information |
Num covering plasmid clones | 37 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | GTGGAGTATT TTCATATTCT CTTGTTTGCC CTGGCAGTGA GCAGTGACGG GTTTTTTGCC GGCATGGCCT ACGGTTTAAA GAAAATTAAG GTTCCCTTGG TTTCGCTGCT GGTTATAGCT ATGGCCTCAG CTCTGGCCGT TAGCTTTTCC ATGTTATGTG GAAGAGGGCT GGCCGCCATA TTCCCTTCTG ATTTTGCCAG TCGCCTGGGA GCGGTAATGC TGATGCTTAT CGGAGTTTGC TTTTTGCTCT CTGCCTGTCG GGATAGAATA GAGAGTATGG ATGAGATAGG CGAAGAGCCC CTTTTTAGCC TGAACATCAA GCCTTTGGGC ATAATCATAC ATATACTAAA AGAACCAGCC CGGGCTGATT TTGATTTATC CGGTGAGATC AGCACCCGGG AAGCTTTTTT TCTCGGGCTG GCTCTGGCTA TGGATGCACT GGGGGCAGGT ATCGGAGTGG CCCTCGCAGG TTTCAATATT CTATTAACAG CCCTGGCTGT GGGTGTGTTA AAATTTATAC TAGTAAATTG TGGGTTGCAA TTGGGAATTA AGATAAAAGC CGAGCGCTGG CAGCTAATTT CCTCCTTGAT ACCCGGCCTT ATGCTGATAA GCCTGGGAAT TCTCGAAATA ATGTAG
|
Protein sequence | MEYFHILLFA LAVSSDGFFA GMAYGLKKIK VPLVSLLVIA MASALAVSFS MLCGRGLAAI FPSDFASRLG AVMLMLIGVC FLLSACRDRI ESMDEIGEEP LFSLNIKPLG IIIHILKEPA RADFDLSGEI STREAFFLGL ALAMDALGAG IGVALAGFNI LLTALAVGVL KFILVNCGLQ LGIKIKAERW QLISSLIPGL MLISLGILEI M
|
| |