Gene Swol_1965 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwol_1965 
Symbol 
ID4283357 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophomonas wolfei subsp. wolfei str. Goettingen 
KingdomBacteria 
Replicon accessionNC_008346 
Strand
Start bp2241187 
End bp2241825 
Gene Length639 bp 
Protein Length212 aa 
Translation table11 
GC content48% 
IMG OID638138848 
Producthypothetical protein 
Protein accessionYP_754633 
Protein GI114567479 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG0811] Biopolymer transport proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGACCGAAT CGTTTTTAAT ACCCCTCAAA GGGTCCATGC ATATCATAGC CTATGGCTTG 
CTGGTACCGA CCCTTATTAT TTTATTATTA TTTGTAGCCC TGGTTATTGT TGAAATGGGT
AGCTTACTGG TAGAAGCCCT GGGTGAACGC CGCCGGAGCA AAGTTAATAT TCCAGAATTA
TTGAATGCCT TCAAGGAAAA AGACTTTGAG GGGATTAGAG ATGAGATCAT GAATAGTAGT
TTGCTAAGGC GACAAAAAGC AGCTTTAAGC GAGCTCCTGA AATATAATGA TTTGCCCGGC
GTTTCCCGCC AGGCGCTGGC CCGTCGTTTG CTTGGTGATG AGGAACTGTA TTATGCTCGT
ATAACTTCCC GAACCGATCT GGTAGCCCGC CTTGGTCCCA TGTTTGGTTT GATGGCAACC
CTTATTCCCC TGGGACCAGG TCTCATTGCC CTTGGTCAGG GTGATACCAA AACTCTGGCA
GATTCACTAC TAATCGCCTT TGATGCTACC GTTACCGGAC TGGCTGCTGC TGGTGTGGCA
TATGCCATAT CCCAACTCCG CAAAAGGTGG TATGAGGATT ACCTGGCTGG TCTGGAAGCG
TTAATGGAAA GCCTGTTGGA GGTGCTGGAA CGTGAATGA
 
Protein sequence
MTESFLIPLK GSMHIIAYGL LVPTLIILLL FVALVIVEMG SLLVEALGER RRSKVNIPEL 
LNAFKEKDFE GIRDEIMNSS LLRRQKAALS ELLKYNDLPG VSRQALARRL LGDEELYYAR
ITSRTDLVAR LGPMFGLMAT LIPLGPGLIA LGQGDTKTLA DSLLIAFDAT VTGLAAAGVA
YAISQLRKRW YEDYLAGLEA LMESLLEVLE RE