Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swol_1965 |
Symbol | |
ID | 4283357 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Syntrophomonas wolfei subsp. wolfei str. Goettingen |
Kingdom | Bacteria |
Replicon accession | NC_008346 |
Strand | - |
Start bp | 2241187 |
End bp | 2241825 |
Gene Length | 639 bp |
Protein Length | 212 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 638138848 |
Product | hypothetical protein |
Protein accession | YP_754633 |
Protein GI | 114567479 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG0811] Biopolymer transport proteins |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGACCGAAT CGTTTTTAAT ACCCCTCAAA GGGTCCATGC ATATCATAGC CTATGGCTTG CTGGTACCGA CCCTTATTAT TTTATTATTA TTTGTAGCCC TGGTTATTGT TGAAATGGGT AGCTTACTGG TAGAAGCCCT GGGTGAACGC CGCCGGAGCA AAGTTAATAT TCCAGAATTA TTGAATGCCT TCAAGGAAAA AGACTTTGAG GGGATTAGAG ATGAGATCAT GAATAGTAGT TTGCTAAGGC GACAAAAAGC AGCTTTAAGC GAGCTCCTGA AATATAATGA TTTGCCCGGC GTTTCCCGCC AGGCGCTGGC CCGTCGTTTG CTTGGTGATG AGGAACTGTA TTATGCTCGT ATAACTTCCC GAACCGATCT GGTAGCCCGC CTTGGTCCCA TGTTTGGTTT GATGGCAACC CTTATTCCCC TGGGACCAGG TCTCATTGCC CTTGGTCAGG GTGATACCAA AACTCTGGCA GATTCACTAC TAATCGCCTT TGATGCTACC GTTACCGGAC TGGCTGCTGC TGGTGTGGCA TATGCCATAT CCCAACTCCG CAAAAGGTGG TATGAGGATT ACCTGGCTGG TCTGGAAGCG TTAATGGAAA GCCTGTTGGA GGTGCTGGAA CGTGAATGA
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Protein sequence | MTESFLIPLK GSMHIIAYGL LVPTLIILLL FVALVIVEMG SLLVEALGER RRSKVNIPEL LNAFKEKDFE GIRDEIMNSS LLRRQKAALS ELLKYNDLPG VSRQALARRL LGDEELYYAR ITSRTDLVAR LGPMFGLMAT LIPLGPGLIA LGQGDTKTLA DSLLIAFDAT VTGLAAAGVA YAISQLRKRW YEDYLAGLEA LMESLLEVLE RE
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