Gene Swol_1828 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwol_1828 
Symbol 
ID4282522 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophomonas wolfei subsp. wolfei str. Goettingen 
KingdomBacteria 
Replicon accessionNC_008346 
Strand
Start bp2088166 
End bp2089389 
Gene Length1224 bp 
Protein Length407 aa 
Translation table11 
GC content51% 
IMG OID638138711 
ProductNADH dehydrogenase (quinone) 
Protein accessionYP_754497 
Protein GI114567343 
COG category[C] Energy production and conversion 
COG ID[COG1894] NADH:ubiquinone oxidoreductase, NADH-binding (51 kD) subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCCGAGG AAATGCGCAT AGTACTGCGC AATTACGGCA AAGTTGATCC GTTGAACATC 
GATAGTTACA CCCAGGTGGG CGGATATCAG GCCTTAGCCA AAGCTAAGAG CATGAGCCAG
ACAGATCTGA TTGAAGAGGT TAAGAAATCA GGATTACGGG GCCGTGGCGG CGCCGGATTT
AACACTGGTA TGAAATGGAG TTTTTCCTAT GGCGTAAAGG CCGATCAGAA ATACGTTATT
TGCAATGCCG ATGAGGGTGA GCCGGGAACT TATAAAGACC GGATTATCAT GGAGAATGAT
CCGCAGAGCG TCCTGGAAGG GATGGCTATT TGTGGGTATG CAATAGGAGC CAATAAGGGC
TATATCTACT GCCGGGGCGA GTACCCCTAC GTAGTGGAAA TCCTCAATAA AGCCATAGCC
CAGGCCAGTG AAAAGGGCCT TCTGGGCGAC TTCAATATCG AAGTACGCAT GGGAGCCGGG
GCCTATGTGT GTGGCGAAGA AAGCGCACTT ATTGAGTCTA TAGAAGGGCA CCGGGGTGAA
CCCCGCTTCA AGCCCCCATT TCCACCGGTT ATCGGTTTGT GGGGCAAGCC CACTATTGTC
AACAATGTAG AAACCTTTGC TAATATTCCC GCCATTGTTG ACAAGGGCGC GGATTGGTAC
AAAGGCATTG GCGCGGCGGG CTATCCGGGA ACCAAAGTCA TGACCTTGAC GGGAGATATT
GTCAACCGCA CTGTTATTGA AGTGCCTACT AATACCACCA TCCGGCAGGT ATTGGACGAT
TTTGGCGGAG GAATTACCGG TGGCAAAAAA TTCAAGGCGG TGCAAATTGG AGGAACATCT
GGCGGATTCA TACCCGAATC ACTGCTCGAC ACCCCGATCG ACTTTGATTC CATGTCAGCC
ATTGGCGCTA CCCTGGGGTC AGGAGCCTTC TTCGTGATGG ACGAGACCCG GGATATAGTG
GATGTAATTG ATCGCATAAG CAAGTTCTTT GCTCATGAAT CGTGCGGCAA GTGTACTCCC
TGCCGGGAGG GAACTCAGCG CATGCATGAA ATGCTGCACC GGGTGAAAAA CGGCGGGGCA
GTTGCCGGCG ATCTAGATTA TATGGAGAGA CTGGGAAGCG TTATGTCCAA AGCCTGCTTG
TGCGGTTTGG GACAGGCGGC TCCGGCTCCA GTGCTAACAA CCTTAAAGCA TTTTAGAAAC
GATTATACAG CCAAGTTCAA TTAA
 
Protein sequence
MAEEMRIVLR NYGKVDPLNI DSYTQVGGYQ ALAKAKSMSQ TDLIEEVKKS GLRGRGGAGF 
NTGMKWSFSY GVKADQKYVI CNADEGEPGT YKDRIIMEND PQSVLEGMAI CGYAIGANKG
YIYCRGEYPY VVEILNKAIA QASEKGLLGD FNIEVRMGAG AYVCGEESAL IESIEGHRGE
PRFKPPFPPV IGLWGKPTIV NNVETFANIP AIVDKGADWY KGIGAAGYPG TKVMTLTGDI
VNRTVIEVPT NTTIRQVLDD FGGGITGGKK FKAVQIGGTS GGFIPESLLD TPIDFDSMSA
IGATLGSGAF FVMDETRDIV DVIDRISKFF AHESCGKCTP CREGTQRMHE MLHRVKNGGA
VAGDLDYMER LGSVMSKACL CGLGQAAPAP VLTTLKHFRN DYTAKFN