Gene Swol_1772 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwol_1772 
Symbol 
ID4282734 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophomonas wolfei subsp. wolfei str. Goettingen 
KingdomBacteria 
Replicon accessionNC_008346 
Strand- 
Start bp2024728 
End bp2025390 
Gene Length663 bp 
Protein Length220 aa 
Translation table11 
GC content45% 
IMG OID638138655 
ProductHDIG domain-containing protein 
Protein accessionYP_754441 
Protein GI114567287 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones3 
Plasmid unclonability p-value0.0000373403 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGTAACAC TGGAAGTGGT AAAGAACAGT CCCATGGTGG AACAGTATAT GCAAATAGGT 
AATGCCTATA TTGGTAATAT TGGAGCCATA GAACATGACC TGCACCATGC CGAGCAAACT 
TCGCAGCTTT GTTCAGAAAT TTTGGGAAAA CTGCACTTTC CTGCACGAGA AGCCGAGCTG 
GCTGCTATTG CTGGTTTTTT ACATGACATC GGCAATCTGG TTAATCGATA TGGGCATGGT 
ATGTCTGGGG CCATTATGGC GTTTTATCTT TTGCTGGACT TGGAAATGGA TACAGAGGAA 
ATAGCGACGA TTATGGGAGC CATAGGTAAT CATGAAGAAC AGGCTCAGGG CAAGAGTATC 
AATAATGTAG CAGCGGCCCT GATTTTGGCT GATAAGTCCG ATGTACACCG CTCCCGGGTG 
CGAAAAACCG AGATGTCAAC TTTCACTCCA CGCGATAGGG TTAATTATGC AGTTACTGGT 
TCCCGGCTGG TGGTTGCACC GGAGGAAAAG ACTATAAGGA TGGAAATTGA TATTGATAAC 
GAAGTATGTT CAGTAATGGA GTATTTTGAG ATATTTTTGA CCAAGATGCT TATGTCCCGG 
CGAGCTGCCG AGTATTTGGG CTGCCGATTC GAACTCTTGA TTAACAACAA CCGGCTATTG 
TAA
 
Protein sequence
MVTLEVVKNS PMVEQYMQIG NAYIGNIGAI EHDLHHAEQT SQLCSEILGK LHFPAREAEL 
AAIAGFLHDI GNLVNRYGHG MSGAIMAFYL LLDLEMDTEE IATIMGAIGN HEEQAQGKSI 
NNVAAALILA DKSDVHRSRV RKTEMSTFTP RDRVNYAVTG SRLVVAPEEK TIRMEIDIDN 
EVCSVMEYFE IFLTKMLMSR RAAEYLGCRF ELLINNNRLL