| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swol_1766 |
|---|
| Symbol | |
|---|
| ID | 4282728 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Syntrophomonas wolfei subsp. wolfei str. Goettingen |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008346 |
|---|
| Strand | - |
|---|
| Start bp | 2019833 |
|---|
| End bp | 2020567 |
|---|
| Gene Length | 735 bp |
|---|
| Protein Length | 244 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 51% |
|---|
| IMG OID | 638138649 |
|---|
| Product | 1-(5-phosphoribosyl)-5-((5- phosphoribosylamino)methylideneamino)imidazole-4- carboxamideisomerase |
|---|
| Protein accession | YP_754435 |
|---|
| Protein GI | 114567281 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0106] Phosphoribosylformimino-5-aminoimidazole carboxamide ribonucleotide (ProFAR) isomerase |
|---|
| TIGRFAM ID | [TIGR00007] phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.483041 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATTATTT ATCCCGCTAT AGATTTAAAA GATGGCCAGT GTGTACGGCT GGTTCAGGGC
CGGGTGGAAA ACAAAACGGT TTATTCTGAT GCCCCCGCCA ATGTAGCCCG TTCTTTTCAG
GAGCAGGGCG CTTCATTCTT ACACATTGTT GATCTCGATG GTGCTTTCCA GGGCAGTCCC
CAGAACCTTA AAGCTATTGA AGCGATAGCT GCAGCGATTG ACATTAGTTT TCAAGTAGGC
GGAGGCCTGC GTCAGCTAAG CGATGTGGAA AAGCTTCTGG CTTTGGGTGC CAGCCGGGTA
ATAATTGGAA CCCGAGCGGT TTCCCACCCG GACTTCATCG CCAACCTGCT GGATAAGTTC
GGCCCTGAGC GCATAGTACT GGGCCTGGAT GCTAAGGAGG GCATGGTGGC GGTGGAAGGA
TGGGTTTCCA CTTCTTCAGT AAGCGCTATA GATTTTGGAT TGCAGATGAA AGCTCTGGGG
ATACAAACGG CCATATACAC AGATGTCTCG CGAGACGGGC TTTTGCAGGG TCCCAACCTG
GCGGCCATAA AAGAGATGGC CAGTAGCACC GGATTGGATA TTATTGCTTC CGGAGGGGTA
AGTAGTCTGG ACAATATAAG AGCCTTGAAA GAGTTGGAGA ATGACGGGGT GAGCGGGGCC
ATTATCGGCA AGGCCCTCTA TGACGGCAAG ATAGGTTTGG TTGATGCTCT TAGGGAAGCG
GAAAGTAAAT TTTAA
|
|---|
| Protein sequence | MIIYPAIDLK DGQCVRLVQG RVENKTVYSD APANVARSFQ EQGASFLHIV DLDGAFQGSP
QNLKAIEAIA AAIDISFQVG GGLRQLSDVE KLLALGASRV IIGTRAVSHP DFIANLLDKF
GPERIVLGLD AKEGMVAVEG WVSTSSVSAI DFGLQMKALG IQTAIYTDVS RDGLLQGPNL
AAIKEMASST GLDIIASGGV SSLDNIRALK ELENDGVSGA IIGKALYDGK IGLVDALREA
ESKF
|
|---|
| |