Gene Swol_1748 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwol_1748 
Symbol 
ID4281793 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophomonas wolfei subsp. wolfei str. Goettingen 
KingdomBacteria 
Replicon accessionNC_008346 
Strand
Start bp1997891 
End bp1998220 
Gene Length330 bp 
Protein Length109 aa 
Translation table11 
GC content39% 
IMG OID638138630 
Producthypothetical protein 
Protein accessionYP_754417 
Protein GI114567263 
COG category[L] Replication, recombination and repair 
COG ID[COG1343] Uncharacterized protein predicted to be involved in DNA repair 
TIGRFAM ID[TIGR01573] CRISPR-associated endoribonuclease Cas2 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATTCATA GTACGAATCG AATTTTCCTC TTTGATGAAT TTATAGCGGA AGAGAGGCGA 
AAATACTTGG TTGTAGTAAT TTATGATATT GTGGATAATC GCCGTCGTGC AGCCTTTGCC
AAGTACTTGA AGGGATTTGG AGTGCGTGTA CAAAAATCAG CCTTTGAATG TATTTTGCCT
GATGCGAAAT ATCAAAAGTT GCTTAAAGGG ATACCCAAAT TAATAGATAA AGAAGATCAA
GTCAGGGTGT ACAAATTGAC TAGCAATGCT GACATCAGAG CCTGGGGAAC AGTTGAGTTG
CTTGAAGAGG AGGAAGTGGT AATTCTATAG
 
Protein sequence
MIHSTNRIFL FDEFIAEERR KYLVVVIYDI VDNRRRAAFA KYLKGFGVRV QKSAFECILP 
DAKYQKLLKG IPKLIDKEDQ VRVYKLTSNA DIRAWGTVEL LEEEEVVIL