Gene Swol_1734 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwol_1734 
Symbol 
ID4282585 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophomonas wolfei subsp. wolfei str. Goettingen 
KingdomBacteria 
Replicon accessionNC_008346 
Strand
Start bp1978695 
End bp1979543 
Gene Length849 bp 
Protein Length282 aa 
Translation table11 
GC content45% 
IMG OID638138611 
Producthypothetical protein 
Protein accessionYP_754403 
Protein GI114567249 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG2834] Outer membrane lipoprotein-sorting protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.199034 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAAGTA GATTATTAGT TAGGTTATAT TTCAGTAGAA CCGTCCCTGT AAATATTATC 
CTCGAACTAA AAAAGAAGGA AATACGCATA GAGTTAAGAA TATATTATAA AAAAGTAGAG
AGGATGATGA ACTTGAAGAA AAACCTGCCT TTAACCCTGT GTTTGCTGGC CCTATTCCTG
TTTACTGCAT TATTAGCTGG TTGCGGTACA GCACCCCAGG ACACCAGCGC CCCGGCTGAT
AAAGAGGCGT CAGCCCCCAG CAGCGACAAA TTGAGTGACA GCGAACCAAT ATTAAAGGAT
TTACTGGGCA AAGGAAAAGC CGTAAGTGAA ATGTCCTTTG ATTGTGAAAC CCAGATAGGG
GAGCAGAAGA TGCTGGTCAA AACCTGGATT AAAGGGAAGA AAGTGCGCAG CGAAATGGAG
AGCCCGGAAG CCGTCGGCAA GATTATTAAT ATAATCGATA GTGCAGCAGG CGTAGTCTAT
GTTTACCAAC CGGAACAAAA GATGGCTACC AAGATGGACA TATCCATGGC CCAACAGGAT
GGTTCCAGTT CCCCACAAGA AGACCTGGAG GCTATGAACC CGGATAAGAT GAAATACGTG
GGCAAAGATA CTATTGACGG AAAGAAGTGC CTGGTTTACG AAATTACCGC GGACAATTCT
GGGACCAGCA AAGTTTGGTT GTGGGAGGAA AACGGCATAC CTCTCCGCAT GGAAGCTACT
GCTGATGGCG AAAAATTGGT GATAGTATAC CGCAACATTA AAGTAGGGGG AATTCCTGAT
TCCATGTTTG AACTGCCTGA GGGAACCCAG ATTATGGAGT TCAATATGCC CACTATGCCC
ACGCCATAA
 
Protein sequence
MKSRLLVRLY FSRTVPVNII LELKKKEIRI ELRIYYKKVE RMMNLKKNLP LTLCLLALFL 
FTALLAGCGT APQDTSAPAD KEASAPSSDK LSDSEPILKD LLGKGKAVSE MSFDCETQIG
EQKMLVKTWI KGKKVRSEME SPEAVGKIIN IIDSAAGVVY VYQPEQKMAT KMDISMAQQD
GSSSPQEDLE AMNPDKMKYV GKDTIDGKKC LVYEITADNS GTSKVWLWEE NGIPLRMEAT
ADGEKLVIVY RNIKVGGIPD SMFELPEGTQ IMEFNMPTMP TP