Gene Swol_1588 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwol_1588 
Symbol 
ID4282192 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophomonas wolfei subsp. wolfei str. Goettingen 
KingdomBacteria 
Replicon accessionNC_008346 
Strand
Start bp1809305 
End bp1810282 
Gene Length978 bp 
Protein Length325 aa 
Translation table11 
GC content44% 
IMG OID638138467 
ProductDNA polymerase III delta subunit-like protein 
Protein accessionYP_754261 
Protein GI114567107 
COG category[L] Replication, recombination and repair 
COG ID[COG1466] DNA polymerase III, delta subunit 
TIGRFAM ID[TIGR01128] DNA polymerase III, delta subunit 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0554592 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTAGGA GGATTTATTT CCTTTGGGGT GAAGAAAGCT ATTTAATTGA CCGGGAACTG 
GAAAGGATTG CAGCGATTAT AGGTCAGGAA AGTGGCGAAG AAGTGGAAAC TATTTATCTG
GACGCAGATG AGCTGAATGC CTATGAATTA CTGGAAGCCC TGCAATTCAG TCCTTTATTT
TCCTTGCAGA GGCTGGTGGT AATAAAGAGG CCCTGGTGGT TGGGAAAAGC CAAACGACGG
GGGGGTAAAA CCGCCGAAAT AGAGAAAATA TTCTTAGATT ACCTGCAGCA GGATATGGAG
GGACAGGTAC TGGTACTGAC AGCCAATGAA CATAGTACTA CTAATCCCCT GGTAAAGATA
CTGGATCGTG AGGCCACCGT AATCGCTTGC AAATCCCTCG GCAGCCAGCA TCTGTCGGAA
TGGATTAATA AGGAGTTCGC TTCCCGTGGT TTGAAGGTAG AAAAGTCCGC CGCCAACCTG
ATGGCGAAAA GCGGACAGGA TATGTATTAC CTGCAAAATC TCATTGATAA AACCGCCTTA
CTGGTAAAGG GGCGGCCGGT AAAAATTGCC GATATTGAAG GAGAACTGGA GACAAAAACT
GAAATCAAGG TATTCAAGTT GAGTGATGCT TTATTGAAGC GTAACCTGAA AGCCTCTTTC
CAGGCCTATA ATCAACTGTT GGTTCAGGGA GAACACCCGA TTTTATTTCT TTATATTATT
GTGCGCCAGT TCATGGCCCT GGCCAGGGTC AAATACTATA ATGAAAAATC ATATGGCAGC
AAGGAAATAG TGGCACAGAC AGGTTTGCAT GAATTCATGG TAAAGAAAAT GTTGGATAAT
GCCCGCAATT TTAGCTGGGA TGAGTTGTGG CAGTTATTTC AAATATTTTT GCAAACGGAT
GTTAAATTTA AGAGCAGCAG CCTGGATGAT AAAATGCTCA TGGAGGCCCT GATAGTGGAA
ATCTGCAGCA AGAGGTAA
 
Protein sequence
MSRRIYFLWG EESYLIDREL ERIAAIIGQE SGEEVETIYL DADELNAYEL LEALQFSPLF 
SLQRLVVIKR PWWLGKAKRR GGKTAEIEKI FLDYLQQDME GQVLVLTANE HSTTNPLVKI
LDREATVIAC KSLGSQHLSE WINKEFASRG LKVEKSAANL MAKSGQDMYY LQNLIDKTAL
LVKGRPVKIA DIEGELETKT EIKVFKLSDA LLKRNLKASF QAYNQLLVQG EHPILFLYII
VRQFMALARV KYYNEKSYGS KEIVAQTGLH EFMVKKMLDN ARNFSWDELW QLFQIFLQTD
VKFKSSSLDD KMLMEALIVE ICSKR